Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX47Q9H0S4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX47Q9H0S4 AC004812.2-201ENST00000611079 2094 ntBASIC24.57■■□□□ 1.52
DDX47Q9H0S4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX47Q9H0S4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX47Q9H0S4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.56■■□□□ 1.52
DDX47Q9H0S4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX47Q9H0S4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
DDX47Q9H0S4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX47Q9H0S4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 AC068473.5-201ENST00000616428 2072 ntBASIC24.54■■□□□ 1.52
DDX47Q9H0S4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX47Q9H0S4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX47Q9H0S4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
DDX47Q9H0S4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
DDX47Q9H0S4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.52■■□□□ 1.52
DDX47Q9H0S4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX47Q9H0S4 AC012676.1-201ENST00000574705 1949 ntBASIC24.52■■□□□ 1.52
DDX47Q9H0S4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX47Q9H0S4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX47Q9H0S4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX47Q9H0S4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX47Q9H0S4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX47Q9H0S4 AL157400.5-201ENST00000507624 621 ntBASIC24.5■■□□□ 1.51
DDX47Q9H0S4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX47Q9H0S4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.5■■□□□ 1.51
DDX47Q9H0S4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.5■■□□□ 1.51
DDX47Q9H0S4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.49■■□□□ 1.51
DDX47Q9H0S4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX47Q9H0S4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
DDX47Q9H0S4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
DDX47Q9H0S4 ABCB10P4-201ENST00000566803 2184 ntBASIC24.48■■□□□ 1.51
DDX47Q9H0S4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX47Q9H0S4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 MIR3648-2-201ENST00000581792 180 ntBASIC24.46■■□□□ 1.51
DDX47Q9H0S4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 MIR3648-1-201ENST00000615959 180 ntBASIC24.46■■□□□ 1.51
DDX47Q9H0S4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX47Q9H0S4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms