Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTL8AQ9BWD3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 KRT18P60-201ENST00000312876 1297 ntBASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 AC129492.7-201ENST00000622992 756 ntBASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL8AQ9BWD3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL8AQ9BWD3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTL8AQ9BWD3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTL8AQ9BWD3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.13■□□□□ 0.81
RTL8AQ9BWD3 AC138932.3-201ENST00000567634 1902 ntBASIC20.13■□□□□ 0.81
RTL8AQ9BWD3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 AP003733.4-201ENST00000623785 1697 ntBASIC20.12■□□□□ 0.81
RTL8AQ9BWD3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL8AQ9BWD3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 FOXO3B-201ENST00000395675 1928 ntBASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
RTL8AQ9BWD3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL8AQ9BWD3 AC087393.1-201ENST00000582896 145 ntBASIC20.09■□□□□ 0.81
RTL8AQ9BWD3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL8AQ9BWD3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL8AQ9BWD3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL8AQ9BWD3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL8AQ9BWD3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL8AQ9BWD3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.08■□□□□ 0.81
RTL8AQ9BWD3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL8AQ9BWD3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
RTL8AQ9BWD3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL8AQ9BWD3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RTL8AQ9BWD3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 MIR6089-201ENST00000616698 64 ntBASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL8AQ9BWD3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTL8AQ9BWD3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTL8AQ9BWD3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 AC139795.1-202ENST00000500444 432 ntBASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL8AQ9BWD3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms