Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF5Q99942 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF5Q99942 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF5Q99942 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF5Q99942 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF5Q99942 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF5Q99942 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF5Q99942 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF5Q99942 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF5Q99942 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF5Q99942 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF5Q99942 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF5Q99942 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF5Q99942 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF5Q99942 AL592295.1-201ENST00000400984 884 ntBASIC18.86■□□□□ 0.61
RNF5Q99942 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF5Q99942 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF5Q99942 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF5Q99942 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF5Q99942 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF5Q99942 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF5Q99942 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF5Q99942 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RNF5Q99942 AC019171.1-201ENST00000601251 1056 ntBASIC18.85■□□□□ 0.61
RNF5Q99942 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF5Q99942 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF5Q99942 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF5Q99942 LONRF2P2-201ENST00000439212 571 ntBASIC18.84■□□□□ 0.61
RNF5Q99942 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF5Q99942 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.84■□□□□ 0.61
RNF5Q99942 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF5Q99942 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF5Q99942 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF5Q99942 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF5Q99942 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF5Q99942 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF5Q99942 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF5Q99942 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF5Q99942 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF5Q99942 AC074183.2-201ENST00000623112 922 ntBASIC18.83■□□□□ 0.6
RNF5Q99942 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF5Q99942 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF5Q99942 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF5Q99942 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RNF5Q99942 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF5Q99942 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF5Q99942 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
RNF5Q99942 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF5Q99942 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF5Q99942 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF5Q99942 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RNF5Q99942 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 AC022616.5-201ENST00000518796 181 ntBASIC18.81■□□□□ 0.6
RNF5Q99942 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF5Q99942 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF5Q99942 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF5Q99942 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF5Q99942 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF5Q99942 AC139795.1-202ENST00000500444 432 ntBASIC18.8■□□□□ 0.6
RNF5Q99942 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF5Q99942 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF5Q99942 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF5Q99942 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF5Q99942 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF5Q99942 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF5Q99942 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF5Q99942 AC141586.4-201ENST00000624558 1573 ntBASIC18.79■□□□□ 0.6
RNF5Q99942 AL139125.2-201ENST00000623134 1869 ntBASIC18.79■□□□□ 0.6
RNF5Q99942 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF5Q99942 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF5Q99942 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF5Q99942 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms