Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MIR6089-201ENST00000616698 64 ntBASIC23.6■■□□□ 1.37
CPNE1Q99829 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE1Q99829 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE1Q99829 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.59■■□□□ 1.37
CPNE1Q99829 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.59■■□□□ 1.37
CPNE1Q99829 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.59■■□□□ 1.37
CPNE1Q99829 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.59■■□□□ 1.37
CPNE1Q99829 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE1Q99829 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.58■■□□□ 1.37
CPNE1Q99829 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.58■■□□□ 1.37
CPNE1Q99829 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE1Q99829 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE1Q99829 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE1Q99829 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CPNE1Q99829 AC007029.1-201ENST00000604183 313 ntBASIC23.58■■□□□ 1.37
CPNE1Q99829 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE1Q99829 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.58■■□□□ 1.36
CPNE1Q99829 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
CPNE1Q99829 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CPNE1Q99829 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
CPNE1Q99829 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
CPNE1Q99829 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CPNE1Q99829 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE1Q99829 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE1Q99829 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE1Q99829 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE1Q99829 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE1Q99829 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE1Q99829 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE1Q99829 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE1Q99829 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE1Q99829 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.55■■□□□ 1.36
CPNE1Q99829 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE1Q99829 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.55■■□□□ 1.36
CPNE1Q99829 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.55■■□□□ 1.36
CPNE1Q99829 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.55■■□□□ 1.36
CPNE1Q99829 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE1Q99829 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CPNE1Q99829 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CPNE1Q99829 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE1Q99829 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE1Q99829 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE1Q99829 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
CPNE1Q99829 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.54■■□□□ 1.36
CPNE1Q99829 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.54■■□□□ 1.36
CPNE1Q99829 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE1Q99829 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE1Q99829 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.53■■□□□ 1.36
CPNE1Q99829 RAP2CP1-202ENST00000605179 643 ntBASIC23.53■■□□□ 1.36
CPNE1Q99829 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CPNE1Q99829 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
CPNE1Q99829 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE1Q99829 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CPNE1Q99829 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.52■■□□□ 1.36
CPNE1Q99829 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE1Q99829 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CPNE1Q99829 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CPNE1Q99829 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.51■■□□□ 1.35
CPNE1Q99829 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.51■■□□□ 1.35
CPNE1Q99829 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE1Q99829 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE1Q99829 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE1Q99829 KRT18P10-201ENST00000388836 1287 ntBASIC23.51■■□□□ 1.35
CPNE1Q99829 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.51■■□□□ 1.35
CPNE1Q99829 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE1Q99829 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE1Q99829 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.5■■□□□ 1.35
CPNE1Q99829 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE1Q99829 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.5■■□□□ 1.35
CPNE1Q99829 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.5■■□□□ 1.35
CPNE1Q99829 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE1Q99829 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE1Q99829 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE1Q99829 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.49■■□□□ 1.35
CPNE1Q99829 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.49■■□□□ 1.35
CPNE1Q99829 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE1Q99829 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE1Q99829 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE1Q99829 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.48■■□□□ 1.35
CPNE1Q99829 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE1Q99829 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CPNE1Q99829 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.47■■□□□ 1.35
CPNE1Q99829 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.47■■□□□ 1.35
CPNE1Q99829 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CPNE1Q99829 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.47■■□□□ 1.35
CPNE1Q99829 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE1Q99829 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE1Q99829 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms