Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.68■■□□□ 1.06
TM9SF2Q99805 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM9SF2Q99805 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TM9SF2Q99805 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM9SF2Q99805 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TM9SF2Q99805 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TM9SF2Q99805 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
TM9SF2Q99805 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
TM9SF2Q99805 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.67■■□□□ 1.06
TM9SF2Q99805 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.67■■□□□ 1.06
TM9SF2Q99805 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM9SF2Q99805 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.67■■□□□ 1.06
TM9SF2Q99805 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.67■■□□□ 1.06
TM9SF2Q99805 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM9SF2Q99805 AC142381.3-201ENST00000568208 1670 ntBASIC21.66■■□□□ 1.06
TM9SF2Q99805 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TM9SF2Q99805 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TM9SF2Q99805 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF2Q99805 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF2Q99805 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF2Q99805 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 RARRES2P1-201ENST00000474487 481 ntBASIC21.65■■□□□ 1.06
TM9SF2Q99805 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
TM9SF2Q99805 AC010501.1-201ENST00000606270 1962 ntBASIC21.65■■□□□ 1.06
TM9SF2Q99805 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF2Q99805 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM9SF2Q99805 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.64■■□□□ 1.06
TM9SF2Q99805 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TM9SF2Q99805 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM9SF2Q99805 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM9SF2Q99805 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.64■■□□□ 1.05
TM9SF2Q99805 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.64■■□□□ 1.05
TM9SF2Q99805 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM9SF2Q99805 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM9SF2Q99805 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
TM9SF2Q99805 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.64■■□□□ 1.05
TM9SF2Q99805 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
TM9SF2Q99805 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.63■■□□□ 1.05
TM9SF2Q99805 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM9SF2Q99805 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
TM9SF2Q99805 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM9SF2Q99805 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.63■■□□□ 1.05
TM9SF2Q99805 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.63■■□□□ 1.05
TM9SF2Q99805 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM9SF2Q99805 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF2Q99805 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF2Q99805 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.62■■□□□ 1.05
TM9SF2Q99805 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.62■■□□□ 1.05
TM9SF2Q99805 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TM9SF2Q99805 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF2Q99805 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.61■■□□□ 1.05
TM9SF2Q99805 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM9SF2Q99805 KRT18P10-201ENST00000388836 1287 ntBASIC21.61■■□□□ 1.05
TM9SF2Q99805 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.61■■□□□ 1.05
TM9SF2Q99805 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TM9SF2Q99805 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.6■■□□□ 1.05
TM9SF2Q99805 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 AC010980.1-201ENST00000587192 1142 ntBASIC21.6■■□□□ 1.05
TM9SF2Q99805 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF2Q99805 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF2Q99805 AC138932.3-201ENST00000567634 1902 ntBASIC21.59■■□□□ 1.05
TM9SF2Q99805 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF2Q99805 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF2Q99805 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.59■■□□□ 1.05
TM9SF2Q99805 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TM9SF2Q99805 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
TM9SF2Q99805 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.59■■□□□ 1.05
TM9SF2Q99805 AC022211.4-201ENST00000625094 2161 ntBASIC21.59■■□□□ 1.05
TM9SF2Q99805 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF2Q99805 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF2Q99805 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF2Q99805 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF2Q99805 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF2Q99805 AL139125.2-201ENST00000623134 1869 ntBASIC21.58■■□□□ 1.04
TM9SF2Q99805 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF2Q99805 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TM9SF2Q99805 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
TM9SF2Q99805 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF2Q99805 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.57■■□□□ 1.04
TM9SF2Q99805 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF2Q99805 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms