Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV9Q99603 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV9Q99603 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRGV9Q99603 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV9Q99603 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.39■□□□□ 0.54
TRGV9Q99603 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV9Q99603 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV9Q99603 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV9Q99603 AC092296.2-201ENST00000589470 999 ntBASIC18.39■□□□□ 0.53
TRGV9Q99603 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV9Q99603 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.38■□□□□ 0.53
TRGV9Q99603 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV9Q99603 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV9Q99603 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV9Q99603 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV9Q99603 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRGV9Q99603 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV9Q99603 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV9Q99603 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.38■□□□□ 0.53
TRGV9Q99603 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV9Q99603 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.36■□□□□ 0.53
TRGV9Q99603 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 ECEL1P2-201ENST00000461596 1295 ntBASIC18.36■□□□□ 0.53
TRGV9Q99603 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRGV9Q99603 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV9Q99603 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV9Q99603 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV9Q99603 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV9Q99603 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRGV9Q99603 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV9Q99603 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV9Q99603 RP9P-202ENST00000450133 1212 ntBASIC18.35■□□□□ 0.53
TRGV9Q99603 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV9Q99603 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV9Q99603 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV9Q99603 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.34■□□□□ 0.53
TRGV9Q99603 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.34■□□□□ 0.53
TRGV9Q99603 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRGV9Q99603 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV9Q99603 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.34■□□□□ 0.53
TRGV9Q99603 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.33■□□□□ 0.53
TRGV9Q99603 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.33■□□□□ 0.53
TRGV9Q99603 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV9Q99603 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.33■□□□□ 0.52
TRGV9Q99603 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV9Q99603 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV9Q99603 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV9Q99603 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV9Q99603 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.32■□□□□ 0.52
TRGV9Q99603 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV9Q99603 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRGV9Q99603 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV9Q99603 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRGV9Q99603 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.31■□□□□ 0.52
TRGV9Q99603 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.31■□□□□ 0.52
TRGV9Q99603 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.31■□□□□ 0.52
TRGV9Q99603 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRGV9Q99603 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV9Q99603 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV9Q99603 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV9Q99603 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.3■□□□□ 0.52
TRGV9Q99603 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV9Q99603 KRT18P10-201ENST00000388836 1287 ntBASIC18.3■□□□□ 0.52
TRGV9Q99603 AC093536.1-201ENST00000569153 554 ntBASIC18.3■□□□□ 0.52
TRGV9Q99603 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRGV9Q99603 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRGV9Q99603 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV9Q99603 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 MIR639-201ENST00000384974 98 ntBASIC18.29■□□□□ 0.52
TRGV9Q99603 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRGV9Q99603 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.29■□□□□ 0.52
TRGV9Q99603 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV9Q99603 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV9Q99603 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV9Q99603 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.28■□□□□ 0.52
TRGV9Q99603 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.28■□□□□ 0.52
TRGV9Q99603 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.28■□□□□ 0.52
TRGV9Q99603 MIR7108-201ENST00000614319 87 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms