Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 FOXO3B-201ENST00000395675 1928 ntBASIC31.26■■■□□ 2.6
PHACTR3Q96KR7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PHACTR3Q96KR7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PHACTR3Q96KR7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.26■■■□□ 2.59
PHACTR3Q96KR7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHACTR3Q96KR7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PHACTR3Q96KR7 AC239859.2-201ENST00000444165 318 ntBASIC31.25■■■□□ 2.59
PHACTR3Q96KR7 THA1P-201ENST00000590384 1145 ntBASIC31.25■■■□□ 2.59
PHACTR3Q96KR7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHACTR3Q96KR7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.24■■■□□ 2.59
PHACTR3Q96KR7 GUSBP5-201ENST00000418136 578 ntBASIC31.24■■■□□ 2.59
PHACTR3Q96KR7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
PHACTR3Q96KR7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
PHACTR3Q96KR7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PHACTR3Q96KR7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHACTR3Q96KR7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHACTR3Q96KR7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHACTR3Q96KR7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
PHACTR3Q96KR7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PHACTR3Q96KR7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.22■■■□□ 2.59
PHACTR3Q96KR7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.22■■■□□ 2.59
PHACTR3Q96KR7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.22■■■□□ 2.59
PHACTR3Q96KR7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PHACTR3Q96KR7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PHACTR3Q96KR7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PHACTR3Q96KR7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PHACTR3Q96KR7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PHACTR3Q96KR7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.2■■■□□ 2.59
PHACTR3Q96KR7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.2■■■□□ 2.59
PHACTR3Q96KR7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PHACTR3Q96KR7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHACTR3Q96KR7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PHACTR3Q96KR7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
PHACTR3Q96KR7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.19■■■□□ 2.58
PHACTR3Q96KR7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHACTR3Q96KR7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.19■■■□□ 2.58
PHACTR3Q96KR7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PHACTR3Q96KR7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
PHACTR3Q96KR7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PHACTR3Q96KR7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.18■■■□□ 2.58
PHACTR3Q96KR7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PHACTR3Q96KR7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 MIR4281-201ENST00000580852 62 ntBASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 AC145676.1-201ENST00000514988 2004 ntBASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PHACTR3Q96KR7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PHACTR3Q96KR7 Z92544.1-202ENST00000571933 1220 ntBASIC31.16■■■□□ 2.58
PHACTR3Q96KR7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PHACTR3Q96KR7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 AC137630.3-201ENST00000607245 391 ntBASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.15■■■□□ 2.58
PHACTR3Q96KR7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PHACTR3Q96KR7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.14■■■□□ 2.58
PHACTR3Q96KR7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHACTR3Q96KR7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.14■■■□□ 2.58
PHACTR3Q96KR7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.14■■■□□ 2.58
PHACTR3Q96KR7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
PHACTR3Q96KR7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.13■■■□□ 2.57
PHACTR3Q96KR7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PHACTR3Q96KR7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.13■■■□□ 2.57
PHACTR3Q96KR7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PHACTR3Q96KR7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
PHACTR3Q96KR7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.12■■■□□ 2.57
PHACTR3Q96KR7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.12■■■□□ 2.57
PHACTR3Q96KR7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHACTR3Q96KR7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
PHACTR3Q96KR7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.11■■■□□ 2.57
PHACTR3Q96KR7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.11■■■□□ 2.57
PHACTR3Q96KR7 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.11■■■□□ 2.57
PHACTR3Q96KR7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PHACTR3Q96KR7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PHACTR3Q96KR7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PHACTR3Q96KR7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
PHACTR3Q96KR7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
PHACTR3Q96KR7 AC011551.1-201ENST00000614101 683 ntBASIC31.09■■■□□ 2.57
PHACTR3Q96KR7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.09■■■□□ 2.57
PHACTR3Q96KR7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.09■■■□□ 2.57
PHACTR3Q96KR7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PHACTR3Q96KR7 AC021242.3-201ENST00000607598 1377 ntBASIC31.08■■■□□ 2.57
PHACTR3Q96KR7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.08■■■□□ 2.57
PHACTR3Q96KR7 SLC6A10P-202ENST00000431994 2058 ntBASIC31.08■■■□□ 2.57
PHACTR3Q96KR7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
PHACTR3Q96KR7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PHACTR3Q96KR7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PHACTR3Q96KR7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.07■■■□□ 2.56
PHACTR3Q96KR7 BX664725.1-201ENST00000438252 379 ntBASIC31.07■■■□□ 2.56
PHACTR3Q96KR7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PHACTR3Q96KR7 MIR4787-201ENST00000607364 84 ntBASIC31.07■■■□□ 2.56
PHACTR3Q96KR7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms