Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE4Q96A23 AC103834.1-201ENST00000520383 144 ntBASIC21.17■□□□□ 0.98
CPNE4Q96A23 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE4Q96A23 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE4Q96A23 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CPNE4Q96A23 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE4Q96A23 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE4Q96A23 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE4Q96A23 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE4Q96A23 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE4Q96A23 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE4Q96A23 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.16■□□□□ 0.98
CPNE4Q96A23 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE4Q96A23 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE4Q96A23 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE4Q96A23 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE4Q96A23 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE4Q96A23 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE4Q96A23 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.15■□□□□ 0.98
CPNE4Q96A23 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CPNE4Q96A23 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE4Q96A23 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE4Q96A23 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE4Q96A23 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE4Q96A23 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.14■□□□□ 0.97
CPNE4Q96A23 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.14■□□□□ 0.97
CPNE4Q96A23 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE4Q96A23 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE4Q96A23 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE4Q96A23 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE4Q96A23 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE4Q96A23 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE4Q96A23 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPNE4Q96A23 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE4Q96A23 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPNE4Q96A23 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE4Q96A23 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE4Q96A23 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CPNE4Q96A23 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE4Q96A23 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CPNE4Q96A23 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CPNE4Q96A23 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE4Q96A23 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE4Q96A23 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.12■□□□□ 0.97
CPNE4Q96A23 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE4Q96A23 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CPNE4Q96A23 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE4Q96A23 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE4Q96A23 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
CPNE4Q96A23 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE4Q96A23 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE4Q96A23 AC103724.3-201ENST00000564481 992 ntBASIC21.1■□□□□ 0.97
CPNE4Q96A23 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.1■□□□□ 0.97
CPNE4Q96A23 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE4Q96A23 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE4Q96A23 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CPNE4Q96A23 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE4Q96A23 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE4Q96A23 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE4Q96A23 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE4Q96A23 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CPNE4Q96A23 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE4Q96A23 AL031848.2-201ENST00000607670 837 ntBASIC21.09■□□□□ 0.97
CPNE4Q96A23 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE4Q96A23 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE4Q96A23 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE4Q96A23 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE4Q96A23 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE4Q96A23 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE4Q96A23 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE4Q96A23 KRT18P24-201ENST00000344739 1156 ntBASIC21.08■□□□□ 0.97
CPNE4Q96A23 AC011551.1-201ENST00000614101 683 ntBASIC21.08■□□□□ 0.97
CPNE4Q96A23 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE4Q96A23 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE4Q96A23 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.07■□□□□ 0.96
CPNE4Q96A23 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CPNE4Q96A23 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE4Q96A23 THA1P-201ENST00000590384 1145 ntBASIC21.07■□□□□ 0.96
CPNE4Q96A23 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE4Q96A23 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE4Q96A23 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE4Q96A23 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE4Q96A23 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.06■□□□□ 0.96
CPNE4Q96A23 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE4Q96A23 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
CPNE4Q96A23 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE4Q96A23 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE4Q96A23 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE4Q96A23 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE4Q96A23 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE4Q96A23 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.05■□□□□ 0.96
CPNE4Q96A23 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE4Q96A23 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE4Q96A23 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms