Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.2■□□□□ 0.98
PTP4A1Q93096 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.2■□□□□ 0.98
PTP4A1Q93096 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.2■□□□□ 0.98
PTP4A1Q93096 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A1Q93096 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.19■□□□□ 0.98
PTP4A1Q93096 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PTP4A1Q93096 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A1Q93096 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.19■□□□□ 0.98
PTP4A1Q93096 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.19■□□□□ 0.98
PTP4A1Q93096 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A1Q93096 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A1Q93096 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A1Q93096 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTP4A1Q93096 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A1Q93096 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A1Q93096 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
PTP4A1Q93096 SMPD5-203ENST00000639008 1464 ntBASIC21.18■□□□□ 0.98
PTP4A1Q93096 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTP4A1Q93096 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTP4A1Q93096 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTP4A1Q93096 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTP4A1Q93096 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
PTP4A1Q93096 MIR3960-201ENST00000583311 91 ntBASIC21.17■□□□□ 0.98
PTP4A1Q93096 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PTP4A1Q93096 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTP4A1Q93096 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTP4A1Q93096 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PTP4A1Q93096 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTP4A1Q93096 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.16■□□□□ 0.98
PTP4A1Q93096 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A1Q93096 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A1Q93096 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.15■□□□□ 0.98
PTP4A1Q93096 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTP4A1Q93096 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTP4A1Q93096 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PTP4A1Q93096 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.14■□□□□ 0.98
PTP4A1Q93096 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.14■□□□□ 0.97
PTP4A1Q93096 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.14■□□□□ 0.97
PTP4A1Q93096 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A1Q93096 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTP4A1Q93096 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PTP4A1Q93096 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.13■□□□□ 0.97
PTP4A1Q93096 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.13■□□□□ 0.97
PTP4A1Q93096 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PTP4A1Q93096 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.13■□□□□ 0.97
PTP4A1Q93096 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PTP4A1Q93096 AC092296.2-201ENST00000589470 999 ntBASIC21.13■□□□□ 0.97
PTP4A1Q93096 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTP4A1Q93096 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.12■□□□□ 0.97
PTP4A1Q93096 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.12■□□□□ 0.97
PTP4A1Q93096 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 AC141586.4-201ENST00000624558 1573 ntBASIC21.12■□□□□ 0.97
PTP4A1Q93096 GPX1-201ENST00000419349 1106 ntBASIC21.12■□□□□ 0.97
PTP4A1Q93096 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.12■□□□□ 0.97
PTP4A1Q93096 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.12■□□□□ 0.97
PTP4A1Q93096 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTP4A1Q93096 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PTP4A1Q93096 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A1Q93096 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.11■□□□□ 0.97
PTP4A1Q93096 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PTP4A1Q93096 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.11■□□□□ 0.97
PTP4A1Q93096 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A1Q93096 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A1Q93096 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A1Q93096 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A1Q93096 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTP4A1Q93096 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTP4A1Q93096 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.11■□□□□ 0.97
PTP4A1Q93096 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PTP4A1Q93096 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.1■□□□□ 0.97
PTP4A1Q93096 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.1■□□□□ 0.97
PTP4A1Q93096 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A1Q93096 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTP4A1Q93096 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.1■□□□□ 0.97
PTP4A1Q93096 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.1■□□□□ 0.97
PTP4A1Q93096 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A1Q93096 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A1Q93096 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTP4A1Q93096 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PTP4A1Q93096 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.09■□□□□ 0.97
PTP4A1Q93096 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms