Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
USP9XQ93008 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP9XQ93008 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP9XQ93008 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP9XQ93008 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
USP9XQ93008 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP9XQ93008 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP9XQ93008 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP9XQ93008 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.98■□□□□ 0.95
USP9XQ93008 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
USP9XQ93008 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP9XQ93008 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP9XQ93008 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP9XQ93008 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP9XQ93008 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP9XQ93008 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP9XQ93008 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.97■□□□□ 0.95
USP9XQ93008 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.97■□□□□ 0.95
USP9XQ93008 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
USP9XQ93008 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.96■□□□□ 0.95
USP9XQ93008 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.96■□□□□ 0.95
USP9XQ93008 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP9XQ93008 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.96■□□□□ 0.95
USP9XQ93008 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.96■□□□□ 0.95
USP9XQ93008 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP9XQ93008 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP9XQ93008 BX255925.1-201ENST00000566954 1854 ntBASIC20.96■□□□□ 0.95
USP9XQ93008 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.96■□□□□ 0.95
USP9XQ93008 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
USP9XQ93008 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.95■□□□□ 0.95
USP9XQ93008 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.95■□□□□ 0.95
USP9XQ93008 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.95■□□□□ 0.94
USP9XQ93008 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.95■□□□□ 0.94
USP9XQ93008 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.95■□□□□ 0.94
USP9XQ93008 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
USP9XQ93008 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP9XQ93008 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP9XQ93008 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.94■□□□□ 0.94
USP9XQ93008 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.94■□□□□ 0.94
USP9XQ93008 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP9XQ93008 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.94■□□□□ 0.94
USP9XQ93008 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.94■□□□□ 0.94
USP9XQ93008 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.94■□□□□ 0.94
USP9XQ93008 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP9XQ93008 AC034268.1-201ENST00000441047 882 ntBASIC20.93■□□□□ 0.94
USP9XQ93008 IKBKGP1-201ENST00000612193 1073 ntBASIC20.93■□□□□ 0.94
USP9XQ93008 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP9XQ93008 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP9XQ93008 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP9XQ93008 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.93■□□□□ 0.94
USP9XQ93008 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.93■□□□□ 0.94
USP9XQ93008 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.93■□□□□ 0.94
USP9XQ93008 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP9XQ93008 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP9XQ93008 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP9XQ93008 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
USP9XQ93008 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
USP9XQ93008 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
USP9XQ93008 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.92■□□□□ 0.94
USP9XQ93008 ID1-201ENST00000376105 1233 ntBASIC20.92■□□□□ 0.94
USP9XQ93008 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.92■□□□□ 0.94
USP9XQ93008 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP9XQ93008 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.92■□□□□ 0.94
USP9XQ93008 AC022517.1-201ENST00000592429 346 ntBASIC20.92■□□□□ 0.94
USP9XQ93008 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP9XQ93008 SNX5-217ENST00000606557 1087 ntBASIC20.91■□□□□ 0.94
USP9XQ93008 AL449106.1-201ENST00000608517 1980 ntBASIC20.91■□□□□ 0.94
USP9XQ93008 CA15P2-201ENST00000611168 834 ntBASIC20.91■□□□□ 0.94
USP9XQ93008 AC092437.1-201ENST00000624794 1048 ntBASIC20.91■□□□□ 0.94
USP9XQ93008 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP9XQ93008 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP9XQ93008 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.9■□□□□ 0.94
USP9XQ93008 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP9XQ93008 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP9XQ93008 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP9XQ93008 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP9XQ93008 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.9■□□□□ 0.94
USP9XQ93008 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP9XQ93008 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP9XQ93008 SRD5A1P1-201ENST00000442297 786 ntBASIC20.89■□□□□ 0.93
USP9XQ93008 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.89■□□□□ 0.93
USP9XQ93008 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP9XQ93008 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP9XQ93008 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.88■□□□□ 0.93
USP9XQ93008 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9XQ93008 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9XQ93008 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9XQ93008 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9XQ93008 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP9XQ93008 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
USP9XQ93008 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP9XQ93008 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.88■□□□□ 0.93
USP9XQ93008 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP9XQ93008 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP9XQ93008 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.87■□□□□ 0.93
USP9XQ93008 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.86■□□□□ 0.93
USP9XQ93008 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP9XQ93008 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.86■□□□□ 0.93
USP9XQ93008 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.86■□□□□ 0.93
USP9XQ93008 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms