Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40AQ8WXH6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB40AQ8WXH6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40AQ8WXH6 LINC00543-201ENST00000567234 1845 ntBASIC20.62■□□□□ 0.89
RAB40AQ8WXH6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40AQ8WXH6 AC068473.5-201ENST00000616428 2072 ntBASIC20.62■□□□□ 0.89
RAB40AQ8WXH6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 AC092296.2-201ENST00000589470 999 ntBASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40AQ8WXH6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB40AQ8WXH6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RAB40AQ8WXH6 ECEL1P2-201ENST00000461596 1295 ntBASIC20.6■□□□□ 0.89
RAB40AQ8WXH6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RAB40AQ8WXH6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RAB40AQ8WXH6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40AQ8WXH6 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 AL359258.2-201ENST00000564063 1566 ntBASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB40AQ8WXH6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40AQ8WXH6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40AQ8WXH6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB40AQ8WXH6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.58■□□□□ 0.88
RAB40AQ8WXH6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40AQ8WXH6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB40AQ8WXH6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40AQ8WXH6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB40AQ8WXH6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RAB40AQ8WXH6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB40AQ8WXH6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB40AQ8WXH6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40AQ8WXH6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40AQ8WXH6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB40AQ8WXH6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 AL157400.5-201ENST00000507624 621 ntBASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40AQ8WXH6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.52■□□□□ 0.87
RAB40AQ8WXH6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms