Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF439Q8NDP4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF439Q8NDP4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZNF439Q8NDP4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF439Q8NDP4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF439Q8NDP4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF439Q8NDP4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF439Q8NDP4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF439Q8NDP4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF439Q8NDP4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF439Q8NDP4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF439Q8NDP4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF439Q8NDP4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 KRT18P10-201ENST00000388836 1287 ntBASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF439Q8NDP4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 AL592293.1-201ENST00000502889 1188 ntBASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF439Q8NDP4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ZNF439Q8NDP4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF439Q8NDP4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ZNF439Q8NDP4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZNF439Q8NDP4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ZNF439Q8NDP4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF439Q8NDP4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF439Q8NDP4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ZNF439Q8NDP4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF439Q8NDP4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF439Q8NDP4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF439Q8NDP4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF439Q8NDP4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF439Q8NDP4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 SPCS2P3-201ENST00000500401 656 ntBASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF439Q8NDP4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 U85056.1-201ENST00000616429 682 ntBASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF439Q8NDP4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 AP003733.4-201ENST00000623785 1697 ntBASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF439Q8NDP4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF439Q8NDP4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF439Q8NDP4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF439Q8NDP4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF439Q8NDP4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms