Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
LEMD2Q8NC56 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LEMD2Q8NC56 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
LEMD2Q8NC56 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LEMD2Q8NC56 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LEMD2Q8NC56 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
LEMD2Q8NC56 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.75■■□□□ 1.55
LEMD2Q8NC56 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LEMD2Q8NC56 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.75■■□□□ 1.55
LEMD2Q8NC56 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.74■■□□□ 1.55
LEMD2Q8NC56 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.74■■□□□ 1.55
LEMD2Q8NC56 AC010997.5-201ENST00000609182 354 ntBASIC24.74■■□□□ 1.55
LEMD2Q8NC56 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LEMD2Q8NC56 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.73■■□□□ 1.55
LEMD2Q8NC56 MTDHP2-201ENST00000601468 714 ntBASIC24.73■■□□□ 1.55
LEMD2Q8NC56 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.73■■□□□ 1.55
LEMD2Q8NC56 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.73■■□□□ 1.55
LEMD2Q8NC56 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.72■■□□□ 1.55
LEMD2Q8NC56 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.72■■□□□ 1.55
LEMD2Q8NC56 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LEMD2Q8NC56 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
LEMD2Q8NC56 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
LEMD2Q8NC56 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 MIR6724-1-201ENST00000616420 92 ntBASIC24.71■■□□□ 1.55
LEMD2Q8NC56 MIR6724-2-201ENST00000616483 92 ntBASIC24.71■■□□□ 1.55
LEMD2Q8NC56 MIR6724-4-201ENST00000617390 92 ntBASIC24.71■■□□□ 1.55
LEMD2Q8NC56 MIR6724-3-201ENST00000622482 92 ntBASIC24.71■■□□□ 1.55
LEMD2Q8NC56 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LEMD2Q8NC56 FOXO3B-201ENST00000395675 1928 ntBASIC24.71■■□□□ 1.55
LEMD2Q8NC56 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
LEMD2Q8NC56 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.7■■□□□ 1.54
LEMD2Q8NC56 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.7■■□□□ 1.54
LEMD2Q8NC56 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LEMD2Q8NC56 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LEMD2Q8NC56 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LEMD2Q8NC56 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LEMD2Q8NC56 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
LEMD2Q8NC56 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LEMD2Q8NC56 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.68■■□□□ 1.54
LEMD2Q8NC56 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.68■■□□□ 1.54
LEMD2Q8NC56 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
LEMD2Q8NC56 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.68■■□□□ 1.54
LEMD2Q8NC56 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LEMD2Q8NC56 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
LEMD2Q8NC56 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LEMD2Q8NC56 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LEMD2Q8NC56 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.66■■□□□ 1.54
LEMD2Q8NC56 AL117332.1-201ENST00000622628 974 ntBASIC24.66■■□□□ 1.54
LEMD2Q8NC56 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.66■■□□□ 1.54
LEMD2Q8NC56 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
LEMD2Q8NC56 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LEMD2Q8NC56 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 MIR3621-201ENST00000580529 85 ntBASIC24.65■■□□□ 1.54
LEMD2Q8NC56 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.65■■□□□ 1.54
LEMD2Q8NC56 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 AL356740.2-201ENST00000601559 647 ntBASIC24.64■■□□□ 1.54
LEMD2Q8NC56 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.64■■□□□ 1.54
LEMD2Q8NC56 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.64■■□□□ 1.53
LEMD2Q8NC56 AC131281.2-201ENST00000520478 145 ntBASIC24.63■■□□□ 1.53
LEMD2Q8NC56 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.63■■□□□ 1.53
LEMD2Q8NC56 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LEMD2Q8NC56 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LEMD2Q8NC56 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
LEMD2Q8NC56 AF131216.4-201ENST00000638924 1588 ntBASIC24.63■■□□□ 1.53
LEMD2Q8NC56 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.62■■□□□ 1.53
LEMD2Q8NC56 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LEMD2Q8NC56 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LEMD2Q8NC56 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.62■■□□□ 1.53
LEMD2Q8NC56 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.62■■□□□ 1.53
LEMD2Q8NC56 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.61■■□□□ 1.53
LEMD2Q8NC56 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LEMD2Q8NC56 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
LEMD2Q8NC56 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
LEMD2Q8NC56 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.61■■□□□ 1.53
LEMD2Q8NC56 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms