Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST2H3AQ71DI3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST2H3AQ71DI3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.69■□□□□ 0.9
HIST2H3AQ71DI3 U85056.1-201ENST00000616429 682 ntBASIC20.69■□□□□ 0.9
HIST2H3AQ71DI3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST2H3AQ71DI3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HIST2H3AQ71DI3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 MIR6089-201ENST00000616698 64 ntBASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H3AQ71DI3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H3AQ71DI3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H3AQ71DI3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST2H3AQ71DI3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H3AQ71DI3 AL139125.2-201ENST00000623134 1869 ntBASIC20.66■□□□□ 0.9
HIST2H3AQ71DI3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H3AQ71DI3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 RPS2P7-201ENST00000447334 885 ntBASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 AC018755.3-202ENST00000596210 929 ntBASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H3AQ71DI3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HIST2H3AQ71DI3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HIST2H3AQ71DI3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HIST2H3AQ71DI3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST2H3AQ71DI3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST2H3AQ71DI3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST2H3AQ71DI3 DUX4L9-201ENST00000449051 1259 ntBASIC20.63■□□□□ 0.89
HIST2H3AQ71DI3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.63■□□□□ 0.89
HIST2H3AQ71DI3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.63■□□□□ 0.89
HIST2H3AQ71DI3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST2H3AQ71DI3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 FOXO3B-201ENST00000395675 1928 ntBASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST2H3AQ71DI3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 KRT18P60-201ENST00000312876 1297 ntBASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 AC087393.1-201ENST00000582896 145 ntBASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 MIR6765-201ENST00000614092 87 ntBASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H3AQ71DI3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 AC129492.7-201ENST00000622992 756 ntBASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST2H3AQ71DI3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST2H3AQ71DI3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST2H3AQ71DI3 AC093323.1-202ENST00000635031 2045 ntBASIC20.58■□□□□ 0.89
HIST2H3AQ71DI3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.58■□□□□ 0.89
HIST2H3AQ71DI3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HIST2H3AQ71DI3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.58■□□□□ 0.89
HIST2H3AQ71DI3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST2H3AQ71DI3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms