Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP1Q6WKZ4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP1Q6WKZ4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.75■■□□□ 1.39
RAB11FIP1Q6WKZ4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP1Q6WKZ4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP1Q6WKZ4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.74■■□□□ 1.39
RAB11FIP1Q6WKZ4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB11FIP1Q6WKZ4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.74■■□□□ 1.39
RAB11FIP1Q6WKZ4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB11FIP1Q6WKZ4 MIR4281-201ENST00000580852 62 ntBASIC23.74■■□□□ 1.39
RAB11FIP1Q6WKZ4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB11FIP1Q6WKZ4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 AC096887.2-201ENST00000623443 1957 ntBASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB11FIP1Q6WKZ4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 FOXO3B-201ENST00000395675 1928 ntBASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB11FIP1Q6WKZ4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 AC021242.3-201ENST00000607598 1377 ntBASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RAB11FIP1Q6WKZ4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.7■■□□□ 1.39
RAB11FIP1Q6WKZ4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB11FIP1Q6WKZ4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.7■■□□□ 1.38
RAB11FIP1Q6WKZ4 UNC93B8-201ENST00000511903 705 ntBASIC23.7■■□□□ 1.38
RAB11FIP1Q6WKZ4 AC011551.1-201ENST00000614101 683 ntBASIC23.7■■□□□ 1.38
RAB11FIP1Q6WKZ4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.7■■□□□ 1.38
RAB11FIP1Q6WKZ4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 TSPY9P-201ENST00000440215 945 ntBASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 TSPY11P-201ENST00000442607 1045 ntBASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB11FIP1Q6WKZ4 AC097639.1-201ENST00000565519 1891 ntBASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAB11FIP1Q6WKZ4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RAB11FIP1Q6WKZ4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 AC010501.1-201ENST00000606270 1962 ntBASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.66■■□□□ 1.38
RAB11FIP1Q6WKZ4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB11FIP1Q6WKZ4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RAB11FIP1Q6WKZ4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RAB11FIP1Q6WKZ4 AC092803.2-201ENST00000564287 1899 ntBASIC23.65■■□□□ 1.38
RAB11FIP1Q6WKZ4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.65■■□□□ 1.38
RAB11FIP1Q6WKZ4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms