Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RNF213Q63HN8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RNF213Q63HN8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF213Q63HN8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF213Q63HN8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.98□□□□□ -0.33
RNF213Q63HN8 AC100797.4-201ENST00000631653 1827 ntBASIC12.98□□□□□ -0.33
RNF213Q63HN8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF213Q63HN8 YBX1P1-201ENST00000445822 960 ntBASIC12.98□□□□□ -0.33
RNF213Q63HN8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.98□□□□□ -0.33
RNF213Q63HN8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC12.98□□□□□ -0.33
RNF213Q63HN8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.97□□□□□ -0.33
RNF213Q63HN8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF213Q63HN8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RNF213Q63HN8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RNF213Q63HN8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF213Q63HN8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF213Q63HN8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC12.97□□□□□ -0.33
RNF213Q63HN8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF213Q63HN8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF213Q63HN8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF213Q63HN8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF213Q63HN8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF213Q63HN8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF213Q63HN8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF213Q63HN8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF213Q63HN8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF213Q63HN8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RNF213Q63HN8 CDCA4P2-201ENST00000441182 718 ntBASIC12.96□□□□□ -0.34
RNF213Q63HN8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RNF213Q63HN8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.96□□□□□ -0.34
RNF213Q63HN8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF213Q63HN8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L2-201ENST00000561772 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L6-201ENST00000626483 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L1-201ENST00000627662 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L8-201ENST00000629013 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L3-201ENST00000630187 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L7-201ENST00000630678 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 DUX4L5-201ENST00000630834 1275 ntBASIC12.95□□□□□ -0.34
RNF213Q63HN8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF213Q63HN8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF213Q63HN8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RNF213Q63HN8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF213Q63HN8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RNF213Q63HN8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.93□□□□□ -0.34
RNF213Q63HN8 AL135925.1-201ENST00000605920 1701 ntBASIC12.93□□□□□ -0.34
RNF213Q63HN8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RNF213Q63HN8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RNF213Q63HN8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF213Q63HN8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RNF213Q63HN8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF213Q63HN8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RNF213Q63HN8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RNF213Q63HN8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF213Q63HN8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.92□□□□□ -0.34
RNF213Q63HN8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.92□□□□□ -0.34
RNF213Q63HN8 AL499627.2-201ENST00000606283 725 ntBASIC12.92□□□□□ -0.34
RNF213Q63HN8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF213Q63HN8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF213Q63HN8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF213Q63HN8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 MIR4651-201ENST00000582622 73 ntBASIC12.91□□□□□ -0.34
RNF213Q63HN8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RNF213Q63HN8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RNF213Q63HN8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.91□□□□□ -0.34
RNF213Q63HN8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
RNF213Q63HN8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RNF213Q63HN8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
RNF213Q63HN8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.9□□□□□ -0.34
RNF213Q63HN8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RNF213Q63HN8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RNF213Q63HN8 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.9□□□□□ -0.34
RNF213Q63HN8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms