Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
VARS2Q5ST30 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.2■■□□□ 1.62
VARS2Q5ST30 FOXO3B-201ENST00000395675 1928 ntBASIC25.2■■□□□ 1.62
VARS2Q5ST30 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
VARS2Q5ST30 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
VARS2Q5ST30 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.19■■□□□ 1.62
VARS2Q5ST30 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.19■■□□□ 1.62
VARS2Q5ST30 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.19■■□□□ 1.62
VARS2Q5ST30 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.19■■□□□ 1.62
VARS2Q5ST30 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.19■■□□□ 1.62
VARS2Q5ST30 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VARS2Q5ST30 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VARS2Q5ST30 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
VARS2Q5ST30 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VARS2Q5ST30 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.18■■□□□ 1.62
VARS2Q5ST30 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.18■■□□□ 1.62
VARS2Q5ST30 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
VARS2Q5ST30 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.17■■□□□ 1.62
VARS2Q5ST30 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VARS2Q5ST30 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
VARS2Q5ST30 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
VARS2Q5ST30 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
VARS2Q5ST30 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VARS2Q5ST30 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
VARS2Q5ST30 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.16■■□□□ 1.62
VARS2Q5ST30 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.16■■□□□ 1.62
VARS2Q5ST30 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VARS2Q5ST30 AC010501.1-201ENST00000606270 1962 ntBASIC25.16■■□□□ 1.62
VARS2Q5ST30 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VARS2Q5ST30 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VARS2Q5ST30 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.15■■□□□ 1.62
VARS2Q5ST30 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
VARS2Q5ST30 TSPY9P-201ENST00000440215 945 ntBASIC25.15■■□□□ 1.62
VARS2Q5ST30 TSPY11P-201ENST00000442607 1045 ntBASIC25.15■■□□□ 1.62
VARS2Q5ST30 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VARS2Q5ST30 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
VARS2Q5ST30 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
VARS2Q5ST30 AC097639.1-201ENST00000565519 1891 ntBASIC25.15■■□□□ 1.62
VARS2Q5ST30 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.14■■□□□ 1.62
VARS2Q5ST30 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.14■■□□□ 1.62
VARS2Q5ST30 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.14■■□□□ 1.62
VARS2Q5ST30 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.14■■□□□ 1.62
VARS2Q5ST30 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
VARS2Q5ST30 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
VARS2Q5ST30 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
VARS2Q5ST30 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VARS2Q5ST30 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 KRT16P3-201ENST00000439127 1283 ntBASIC25.13■■□□□ 1.61
VARS2Q5ST30 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 AC092028.1-203ENST00000608262 953 ntBASIC25.13■■□□□ 1.61
VARS2Q5ST30 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VARS2Q5ST30 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VARS2Q5ST30 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
VARS2Q5ST30 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
VARS2Q5ST30 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.12■■□□□ 1.61
VARS2Q5ST30 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.12■■□□□ 1.61
VARS2Q5ST30 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
VARS2Q5ST30 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
VARS2Q5ST30 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.11■■□□□ 1.61
VARS2Q5ST30 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
VARS2Q5ST30 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
VARS2Q5ST30 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
VARS2Q5ST30 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.11■■□□□ 1.61
VARS2Q5ST30 AC092803.2-201ENST00000564287 1899 ntBASIC25.11■■□□□ 1.61
VARS2Q5ST30 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VARS2Q5ST30 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
VARS2Q5ST30 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
VARS2Q5ST30 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.1■■□□□ 1.61
VARS2Q5ST30 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
VARS2Q5ST30 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
VARS2Q5ST30 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VARS2Q5ST30 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.09■■□□□ 1.61
VARS2Q5ST30 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
VARS2Q5ST30 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VARS2Q5ST30 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VARS2Q5ST30 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VARS2Q5ST30 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VARS2Q5ST30 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.08■■□□□ 1.61
VARS2Q5ST30 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.08■■□□□ 1.61
VARS2Q5ST30 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.08■■□□□ 1.61
VARS2Q5ST30 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
VARS2Q5ST30 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
VARS2Q5ST30 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
VARS2Q5ST30 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
VARS2Q5ST30 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.07■■□□□ 1.6
VARS2Q5ST30 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
VARS2Q5ST30 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.06■■□□□ 1.6
VARS2Q5ST30 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VARS2Q5ST30 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms