Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 tR(ACG)OtR(ACG)O 73 nt5.65□□□□□ -1.5
RPN8Q08723 YJL171CYJL171C 1191 nt5.65□□□□□ -1.5
RPN8Q08723 YNR040WYNR040W 771 nt5.65□□□□□ -1.5
RPN8Q08723 YNR075C-AYNR075C-A 93 nt5.65□□□□□ -1.5
RPN8Q08723 RDL2YOR286W 450 nt5.65□□□□□ -1.5
RPN8Q08723 EFM4YIL064W 774 nt5.64□□□□□ -1.51
RPN8Q08723 GAT4YIR013C 366 nt5.64□□□□□ -1.51
RPN8Q08723 YTH1YPR107C 627 nt5.64□□□□□ -1.51
RPN8Q08723 MNN2YBR015C 1794 nt5.64□□□□□ -1.51
RPN8Q08723 YMR155WYMR155W 1644 nt5.63□□□□□ -1.51
RPN8Q08723 HSP78YDR258C 2436 nt5.63□□□□□ -1.51
RPN8Q08723 MAK32YCR019W 1092 nt5.63□□□□□ -1.51
RPN8Q08723 SUP19tS(UGA)E 82 nt5.63□□□□□ -1.51
RPN8Q08723 SUP17tS(UGA)I 82 nt5.63□□□□□ -1.51
RPN8Q08723 SUP16tS(UGA)P 82 nt5.63□□□□□ -1.51
RPN8Q08723 PGU1YJR153W 1086 nt5.63□□□□□ -1.51
RPN8Q08723 MRP17YKL003C 396 nt5.63□□□□□ -1.51
RPN8Q08723 HSP26YBR072W 645 nt5.63□□□□□ -1.51
RPN8Q08723 MRPL36YBR122C 534 nt5.63□□□□□ -1.51
RPN8Q08723 CLP1YOR250C 1338 nt5.63□□□□□ -1.51
RPN8Q08723 QDR3YBR043C 2070 nt5.63□□□□□ -1.51
RPN8Q08723 VBA1YMR088C 1689 nt5.63□□□□□ -1.51
RPN8Q08723 AAP1YHR047C 2571 nt5.62□□□□□ -1.51
RPN8Q08723 ERC1YHR032W 1746 nt5.62□□□□□ -1.51
RPN8Q08723 YDL057WYDL057W 987 nt5.62□□□□□ -1.51
RPN8Q08723 GIR2YDR152W 798 nt5.62□□□□□ -1.51
RPN8Q08723 MLC1YGL106W 450 nt5.62□□□□□ -1.51
RPN8Q08723 VMA16YHR026W 642 nt5.62□□□□□ -1.51
RPN8Q08723 ATG4YNL223W 1485 nt5.62□□□□□ -1.51
RPN8Q08723 SMF2YHR050W 1650 nt5.62□□□□□ -1.51
RPN8Q08723 PDC1YLR044C 1692 nt5.62□□□□□ -1.51
RPN8Q08723 ERG7YHR072W 2196 nt5.62□□□□□ -1.51
RPN8Q08723 ABZ1YNR033W 2364 nt5.62□□□□□ -1.51
RPN8Q08723 FLC3YGL139W 2409 nt5.62□□□□□ -1.51
RPN8Q08723 YCL065WYCL065W 369 nt5.61□□□□□ -1.51
RPN8Q08723 ADY2YCR010C 852 nt5.61□□□□□ -1.51
RPN8Q08723 YDR053WYDR053W 396 nt5.61□□□□□ -1.51
RPN8Q08723 RME1YGR044C 903 nt5.61□□□□□ -1.51
RPN8Q08723 YJU3YKL094W 942 nt5.61□□□□□ -1.51
RPN8Q08723 MSN2YMR037C 2115 nt5.61□□□□□ -1.51
RPN8Q08723 OXP1YKL215C 3861 nt5.61□□□□□ -1.51
RPN8Q08723 MID1YNL291C 1647 nt5.6□□□□□ -1.51
RPN8Q08723 YPL277CYPL277C 1464 nt5.6□□□□□ -1.51
RPN8Q08723 YCR047W-AYCR047W-A 207 nt5.6□□□□□ -1.51
RPN8Q08723 ARP2YDL029W 1176 nt5.6□□□□□ -1.51
RPN8Q08723 YER148W-AYER148W-A 579 nt5.6□□□□□ -1.51
RPN8Q08723 CDC11YJR076C 1248 nt5.6□□□□□ -1.51
RPN8Q08723 UBX2YML013W 1755 nt5.6□□□□□ -1.51
RPN8Q08723 ASF2YDL197C 1578 nt5.59□□□□□ -1.51
RPN8Q08723 SIP2YGL208W 1248 nt5.59□□□□□ -1.51
RPN8Q08723 RPS9AYPL081W 594 nt5.59□□□□□ -1.51
RPN8Q08723 SSK1YLR006C 2139 nt5.59□□□□□ -1.52
RPN8Q08723 YKL031WYKL031W 414 nt5.58□□□□□ -1.52
RPN8Q08723 ARG1YOL058W 1263 nt5.58□□□□□ -1.52
RPN8Q08723 RRN3YKL125W 1884 nt5.58□□□□□ -1.52
RPN8Q08723 CIT3YPR001W 1461 nt5.58□□□□□ -1.52
RPN8Q08723 MCM3YEL032W 2916 nt5.58□□□□□ -1.52
RPN8Q08723 ECM3YOR092W 1842 nt5.58□□□□□ -1.52
RPN8Q08723 ADE13YLR359W 1449 nt5.57□□□□□ -1.52
RPN8Q08723 CHL4YDR254W 1377 nt5.57□□□□□ -1.52
RPN8Q08723 GLE1YDL207W 1617 nt5.57□□□□□ -1.52
RPN8Q08723 GYP1YOR070C 1914 nt5.57□□□□□ -1.52
RPN8Q08723 IDP1YDL066W 1287 nt5.57□□□□□ -1.52
RPN8Q08723 SOH1YGL127C 384 nt5.57□□□□□ -1.52
RPN8Q08723 RHO2YNL090W 579 nt5.57□□□□□ -1.52
RPN8Q08723 CAR1YPL111W 1002 nt5.57□□□□□ -1.52
RPN8Q08723 HSF1YGL073W 2502 nt5.56□□□□□ -1.52
RPN8Q08723 JIP4YDR475C 2631 nt5.56□□□□□ -1.52
RPN8Q08723 YRA1YDR381W 681 nt5.56□□□□□ -1.52
RPN8Q08723 YEL077CYEL077C 3834 nt5.56□□□□□ -1.52
RPN8Q08723 SPG4YMR107W 348 nt5.56□□□□□ -1.52
RPN8Q08723 SUE1YPR151C 621 nt5.56□□□□□ -1.52
RPN8Q08723 RRT2YBR246W 1164 nt5.56□□□□□ -1.52
RPN8Q08723 GUF1YLR289W 1938 nt5.56□□□□□ -1.52
RPN8Q08723 SIA1YOR137C 1869 nt5.56□□□□□ -1.52
RPN8Q08723 VRP1YLR337C 2454 nt5.55□□□□□ -1.52
RPN8Q08723 RPT2YDL007W 1314 nt5.55□□□□□ -1.52
RPN8Q08723 YDR154CYDR154C 351 nt5.55□□□□□ -1.52
RPN8Q08723 YEA6YEL006W 1008 nt5.55□□□□□ -1.52
RPN8Q08723 RPS2YGL123W 765 nt5.55□□□□□ -1.52
RPN8Q08723 ARR3YPR201W 1215 nt5.55□□□□□ -1.52
RPN8Q08723 YPK2YMR104C 2034 nt5.54□□□□□ -1.52
RPN8Q08723 GAA1YLR088W 1845 nt5.54□□□□□ -1.52
RPN8Q08723 HAP2YGL237C 798 nt5.54□□□□□ -1.52
RPN8Q08723 DCN1YLR128W 810 nt5.54□□□□□ -1.52
RPN8Q08723 LST8YNL006W 912 nt5.54□□□□□ -1.52
RPN8Q08723 DAL82YNL314W 768 nt5.54□□□□□ -1.52
RPN8Q08723 RBD2YPL246C 789 nt5.54□□□□□ -1.52
RPN8Q08723 DBF4YDR052C 2115 nt5.54□□□□□ -1.52
RPN8Q08723 YGL036WYGL036W 2730 nt5.54□□□□□ -1.52
RPN8Q08723 YGR182CYGR182C 354 nt5.53□□□□□ -1.52
RPN8Q08723 tX(XXX)DtX(XXX)D 100 nt5.53□□□□□ -1.52
RPN8Q08723 RMA1YKL132C 1293 nt5.53□□□□□ -1.52
RPN8Q08723 LDB18YLL049W 540 nt5.53□□□□□ -1.52
RPN8Q08723 YLR317WYLR317W 435 nt5.53□□□□□ -1.52
RPN8Q08723 YPR098CYPR098C 486 nt5.53□□□□□ -1.52
RPN8Q08723 VPS1YKR001C 2115 nt5.53□□□□□ -1.52
RPN8Q08723 TAH18YPR048W 1872 nt5.52□□□□□ -1.53
RPN8Q08723 AMD1YML035C 2433 nt5.52□□□□□ -1.53
RPN8Q08723 DIA3YDL024C 1407 nt5.52□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 85.2 ms