Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 CSL4YNL232W 879 nt5.36□□□□□ -1.55
RRP40Q08285 CDC19YAL038W 1503 nt5.36□□□□□ -1.55
RRP40Q08285 BUD9YGR041W 1644 nt5.36□□□□□ -1.55
RRP40Q08285 YEH1YLL012W 1722 nt5.36□□□□□ -1.55
RRP40Q08285 YIR007WYIR007W 2295 nt5.36□□□□□ -1.55
RRP40Q08285 FLC3YGL139W 2409 nt5.36□□□□□ -1.55
RRP40Q08285 HIR1YBL008W 2523 nt5.35□□□□□ -1.55
RRP40Q08285 ERG7YHR072W 2196 nt5.35□□□□□ -1.55
RRP40Q08285 SHM1YBR263W 1473 nt5.35□□□□□ -1.55
RRP40Q08285 YFL052WYFL052W 1398 nt5.35□□□□□ -1.55
RRP40Q08285 YDR154CYDR154C 351 nt5.35□□□□□ -1.55
RRP40Q08285 YKL031WYKL031W 414 nt5.35□□□□□ -1.55
RRP40Q08285 SNU71YGR013W 1863 nt5.34□□□□□ -1.55
RRP40Q08285 ECM3YOR092W 1842 nt5.34□□□□□ -1.55
RRP40Q08285 YDL057WYDL057W 987 nt5.34□□□□□ -1.55
RRP40Q08285 YGR022CYGR022C 330 nt5.34□□□□□ -1.55
RRP40Q08285 EPS1YIL005W 2106 nt5.34□□□□□ -1.55
RRP40Q08285 RDL2YOR286W 450 nt5.34□□□□□ -1.55
RRP40Q08285 CST6YIL036W 1764 nt5.34□□□□□ -1.56
RRP40Q08285 OXP1YKL215C 3861 nt5.34□□□□□ -1.56
RRP40Q08285 CWC21YDR482C 408 nt5.33□□□□□ -1.56
RRP40Q08285 MRP17YKL003C 396 nt5.33□□□□□ -1.56
RRP40Q08285 YKL223WYKL223W 333 nt5.33□□□□□ -1.56
RRP40Q08285 SUE1YPR151C 621 nt5.33□□□□□ -1.56
RRP40Q08285 SMF2YHR050W 1650 nt5.33□□□□□ -1.56
RRP40Q08285 ROG3YFR022W 2202 nt5.32□□□□□ -1.56
RRP40Q08285 SNZ3YFL059W 897 nt5.32□□□□□ -1.56
RRP40Q08285 MTC2YKL098W 1074 nt5.32□□□□□ -1.56
RRP40Q08285 SNZ2YNL333W 897 nt5.32□□□□□ -1.56
RRP40Q08285 YNR075C-AYNR075C-A 93 nt5.32□□□□□ -1.56
RRP40Q08285 ARR3YPR201W 1215 nt5.32□□□□□ -1.56
RRP40Q08285 MID1YNL291C 1647 nt5.32□□□□□ -1.56
RRP40Q08285 ATP1YBL099W 1638 nt5.32□□□□□ -1.56
RRP40Q08285 CMR1YDL156W 1569 nt5.32□□□□□ -1.56
RRP40Q08285 DBP9YLR276C 1785 nt5.32□□□□□ -1.56
RRP40Q08285 CHS5YLR330W 2016 nt5.31□□□□□ -1.56
RRP40Q08285 IME2YJL106W 1938 nt5.31□□□□□ -1.56
RRP40Q08285 GUA1YMR217W 1578 nt5.31□□□□□ -1.56
RRP40Q08285 DON1YDR273W 1098 nt5.31□□□□□ -1.56
RRP40Q08285 RPR2YIR015W 435 nt5.31□□□□□ -1.56
RRP40Q08285 ODC2YOR222W 924 nt5.31□□□□□ -1.56
RRP40Q08285 QDR3YBR043C 2070 nt5.31□□□□□ -1.56
RRP40Q08285 SSK22YCR073C 3996 nt5.31□□□□□ -1.56
RRP40Q08285 BUL1YMR275C 2931 nt5.3□□□□□ -1.56
RRP40Q08285 GSY2YLR258W 2118 nt5.3□□□□□ -1.56
RRP40Q08285 GFD1YMR255W 567 nt5.3□□□□□ -1.56
RRP40Q08285 SOH1YGL127C 384 nt5.29□□□□□ -1.56
RRP40Q08285 DCN1YLR128W 810 nt5.29□□□□□ -1.56
RRP40Q08285 YLR296WYLR296W 327 nt5.29□□□□□ -1.56
RRP40Q08285 RBD2YPL246C 789 nt5.29□□□□□ -1.56
RRP40Q08285 MRPL36YBR122C 534 nt5.29□□□□□ -1.56
RRP40Q08285 GAA1YLR088W 1845 nt5.29□□□□□ -1.56
RRP40Q08285 VPS1YKR001C 2115 nt5.29□□□□□ -1.56
RRP40Q08285 HCR1YLR192C 798 nt5.28□□□□□ -1.56
RRP40Q08285 YOL131WYOL131W 327 nt5.28□□□□□ -1.56
RRP40Q08285 MSN2YMR037C 2115 nt5.27□□□□□ -1.57
RRP40Q08285 IDP1YDL066W 1287 nt5.27□□□□□ -1.57
RRP40Q08285 STL1YDR536W 1710 nt5.27□□□□□ -1.57
RRP40Q08285 POR1YNL055C 852 nt5.27□□□□□ -1.57
RRP40Q08285 RIM101YHL027W 1878 nt5.26□□□□□ -1.57
RRP40Q08285 YDR396WYDR396W 501 nt5.26□□□□□ -1.57
RRP40Q08285 FAF1YIL019W 1041 nt5.26□□□□□ -1.57
RRP40Q08285 EFM4YIL064W 774 nt5.26□□□□□ -1.57
RRP40Q08285 CHL4YDR254W 1377 nt5.26□□□□□ -1.57
RRP40Q08285 CLP1YOR250C 1338 nt5.25□□□□□ -1.57
RRP40Q08285 TBF1YPL128C 1689 nt5.25□□□□□ -1.57
RRP40Q08285 RHB1YCR027C 630 nt5.25□□□□□ -1.57
RRP40Q08285 CHO1YER026C 831 nt5.25□□□□□ -1.57
RRP40Q08285 PIN2YOR104W 849 nt5.25□□□□□ -1.57
RRP40Q08285 TAH18YPR048W 1872 nt5.25□□□□□ -1.57
RRP40Q08285 BRL1YHR036W 1416 nt5.24□□□□□ -1.57
RRP40Q08285 TRK2YKR050W 2670 nt5.24□□□□□ -1.57
RRP40Q08285 UGO1YDR470C 1509 nt5.24□□□□□ -1.57
RRP40Q08285 YFR052C-AYFR052C-A 306 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)CtN(GUU)C 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)FtN(GUU)F 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)GtN(GUU)G 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)KtN(GUU)K 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)LtN(GUU)L 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)N1tN(GUU)N1 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)N2tN(GUU)N2 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)O1tN(GUU)O1 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)O2tN(GUU)O2 74 nt5.24□□□□□ -1.57
RRP40Q08285 tN(GUU)PtN(GUU)P 74 nt5.24□□□□□ -1.57
RRP40Q08285 CDC11YJR076C 1248 nt5.24□□□□□ -1.57
RRP40Q08285 PGA3YML125C 939 nt5.24□□□□□ -1.57
RRP40Q08285 TRP3YKL211C 1455 nt5.24□□□□□ -1.57
RRP40Q08285 RSC30YHR056C 2652 nt5.23□□□□□ -1.57
RRP40Q08285 SHE10YGL228W 1734 nt5.23□□□□□ -1.57
RRP40Q08285 ADY2YCR010C 852 nt5.23□□□□□ -1.57
RRP40Q08285 HSX1tR(CCU)J 72 nt5.23□□□□□ -1.57
RRP40Q08285 YNL108CYNL108C 813 nt5.23□□□□□ -1.57
RRP40Q08285 RPS15YOL040C 429 nt5.23□□□□□ -1.57
RRP40Q08285 TFC6YDR362C 2019 nt5.23□□□□□ -1.57
RRP40Q08285 GYP1YOR070C 1914 nt5.23□□□□□ -1.57
RRP40Q08285 YCR097W-AYCR097W-A 267 nt5.22□□□□□ -1.57
RRP40Q08285 COX26YDR119W-A 201 nt5.22□□□□□ -1.57
RRP40Q08285 TFS1YLR178C 660 nt5.22□□□□□ -1.57
RRP40Q08285 YLR317WYLR317W 435 nt5.22□□□□□ -1.57
RRP40Q08285 YBR230W-AYBR230W-A 201 nt5.22□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms