Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB11AP62491 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB11AP62491 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19■□□□□ 0.63
RAB11AP62491 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 AC126177.7-201ENST00000547904 679 ntBASIC19■□□□□ 0.63
RAB11AP62491 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19■□□□□ 0.63
RAB11AP62491 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB11AP62491 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19■□□□□ 0.63
RAB11AP62491 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 LINC01124-201ENST00000409786 2117 ntBASIC18.99■□□□□ 0.63
RAB11AP62491 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB11AP62491 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAB11AP62491 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB11AP62491 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB11AP62491 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RAB11AP62491 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB11AP62491 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB11AP62491 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB11AP62491 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB11AP62491 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAB11AP62491 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAB11AP62491 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RAB11AP62491 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.97■□□□□ 0.63
RAB11AP62491 DUX4L11-201ENST00000611504 1267 ntBASIC18.97■□□□□ 0.63
RAB11AP62491 DUX4L12-201ENST00000614593 1267 ntBASIC18.97■□□□□ 0.63
RAB11AP62491 DUX4L14-201ENST00000621227 1267 ntBASIC18.97■□□□□ 0.63
RAB11AP62491 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAB11AP62491 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAB11AP62491 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11AP62491 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11AP62491 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11AP62491 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.96■□□□□ 0.63
RAB11AP62491 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.96■□□□□ 0.63
RAB11AP62491 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB11AP62491 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11AP62491 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11AP62491 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB11AP62491 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB11AP62491 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RAB11AP62491 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB11AP62491 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB11AP62491 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB11AP62491 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11AP62491 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB11AP62491 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB11AP62491 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RAB11AP62491 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAB11AP62491 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB11AP62491 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RAB11AP62491 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.93■□□□□ 0.62
RAB11AP62491 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB11AP62491 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB11AP62491 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB11AP62491 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB11AP62491 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB11AP62491 HLA-V-202ENST00000446817 847 ntBASIC18.93■□□□□ 0.62
RAB11AP62491 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB11AP62491 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB11AP62491 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB11AP62491 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11AP62491 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11AP62491 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11AP62491 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11AP62491 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RAB11AP62491 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11AP62491 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11AP62491 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAB11AP62491 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB11AP62491 PKD1P6-201ENST00000343738 4769 ntBASIC18.91■□□□□ 0.62
RAB11AP62491 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11AP62491 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms