Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
PPP4CP60510 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4CP60510 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4CP60510 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4CP60510 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4CP60510 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.31■■■□□ 2.12
PPP4CP60510 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.3■■■□□ 2.12
PPP4CP60510 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4CP60510 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.3■■■□□ 2.12
PPP4CP60510 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.3■■■□□ 2.12
PPP4CP60510 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4CP60510 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4CP60510 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4CP60510 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4CP60510 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PPP4CP60510 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.29■■■□□ 2.12
PPP4CP60510 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
PPP4CP60510 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.28■■■□□ 2.12
PPP4CP60510 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
PPP4CP60510 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4CP60510 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PPP4CP60510 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.27■■■□□ 2.12
PPP4CP60510 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.27■■■□□ 2.12
PPP4CP60510 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.26■■■□□ 2.11
PPP4CP60510 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
PPP4CP60510 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.26■■■□□ 2.11
PPP4CP60510 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
PPP4CP60510 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PPP4CP60510 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PPP4CP60510 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.25■■■□□ 2.11
PPP4CP60510 UNC93B8-201ENST00000511903 705 ntBASIC28.25■■■□□ 2.11
PPP4CP60510 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.25■■■□□ 2.11
PPP4CP60510 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
PPP4CP60510 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
PPP4CP60510 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.24■■■□□ 2.11
PPP4CP60510 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4CP60510 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
PPP4CP60510 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.24■■■□□ 2.11
PPP4CP60510 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.24■■■□□ 2.11
PPP4CP60510 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.24■■■□□ 2.11
PPP4CP60510 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4CP60510 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4CP60510 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.24■■■□□ 2.11
PPP4CP60510 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4CP60510 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4CP60510 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4CP60510 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.23■■■□□ 2.11
PPP4CP60510 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
PPP4CP60510 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.23■■■□□ 2.11
PPP4CP60510 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4CP60510 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4CP60510 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
PPP4CP60510 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.22■■■□□ 2.11
PPP4CP60510 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4CP60510 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4CP60510 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4CP60510 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4CP60510 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.22■■■□□ 2.11
PPP4CP60510 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.22■■■□□ 2.11
PPP4CP60510 AC092028.1-203ENST00000608262 953 ntBASIC28.22■■■□□ 2.11
PPP4CP60510 AC131212.1-201ENST00000613771 668 ntBASIC28.22■■■□□ 2.11
PPP4CP60510 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.22■■■□□ 2.11
PPP4CP60510 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4CP60510 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4CP60510 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PPP4CP60510 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PPP4CP60510 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
PPP4CP60510 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.2■■■□□ 2.11
PPP4CP60510 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PPP4CP60510 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PPP4CP60510 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PPP4CP60510 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPP4CP60510 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.2■■■□□ 2.1
PPP4CP60510 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPP4CP60510 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.19■■■□□ 2.1
PPP4CP60510 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.19■■■□□ 2.1
PPP4CP60510 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPP4CP60510 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PPP4CP60510 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.19■■■□□ 2.1
PPP4CP60510 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.19■■■□□ 2.1
PPP4CP60510 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PPP4CP60510 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
PPP4CP60510 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.18■■■□□ 2.1
PPP4CP60510 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.18■■■□□ 2.1
PPP4CP60510 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.18■■■□□ 2.1
PPP4CP60510 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPP4CP60510 AF131216.4-201ENST00000638924 1588 ntBASIC28.18■■■□□ 2.1
PPP4CP60510 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPP4CP60510 AC090877.2-201ENST00000558441 1738 ntBASIC28.18■■■□□ 2.1
PPP4CP60510 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.18■■■□□ 2.1
PPP4CP60510 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.18■■■□□ 2.1
PPP4CP60510 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.17■■■□□ 2.1
PPP4CP60510 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PPP4CP60510 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms