Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 AL157400.5-201ENST00000507624 621 ntBASIC20.01■□□□□ 0.79
TMEM50BP56557 AC025884.2-201ENST00000553429 711 ntBASIC20.01■□□□□ 0.79
TMEM50BP56557 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM50BP56557 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM50BP56557 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM50BP56557 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM50BP56557 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM50BP56557 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM50BP56557 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM50BP56557 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20■□□□□ 0.79
TMEM50BP56557 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM50BP56557 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TMEM50BP56557 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20■□□□□ 0.79
TMEM50BP56557 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM50BP56557 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20■□□□□ 0.79
TMEM50BP56557 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20■□□□□ 0.79
TMEM50BP56557 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TMEM50BP56557 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TMEM50BP56557 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TMEM50BP56557 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM50BP56557 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20■□□□□ 0.79
TMEM50BP56557 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM50BP56557 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TMEM50BP56557 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TMEM50BP56557 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM50BP56557 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM50BP56557 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM50BP56557 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM50BP56557 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM50BP56557 AC004812.2-201ENST00000611079 2094 ntBASIC19.99■□□□□ 0.79
TMEM50BP56557 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM50BP56557 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM50BP56557 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TMEM50BP56557 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM50BP56557 ABHD17AP4-201ENST00000411545 909 ntBASIC19.98■□□□□ 0.79
TMEM50BP56557 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM50BP56557 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM50BP56557 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM50BP56557 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM50BP56557 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM50BP56557 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM50BP56557 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM50BP56557 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.97■□□□□ 0.79
TMEM50BP56557 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.97■□□□□ 0.79
TMEM50BP56557 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM50BP56557 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM50BP56557 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM50BP56557 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM50BP56557 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM50BP56557 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM50BP56557 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM50BP56557 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM50BP56557 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM50BP56557 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM50BP56557 AC016575.1-201ENST00000607026 382 ntBASIC19.96■□□□□ 0.79
TMEM50BP56557 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM50BP56557 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM50BP56557 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM50BP56557 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM50BP56557 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM50BP56557 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM50BP56557 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM50BP56557 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM50BP56557 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM50BP56557 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM50BP56557 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM50BP56557 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
TMEM50BP56557 MIR6089-201ENST00000616698 64 ntBASIC19.94■□□□□ 0.78
TMEM50BP56557 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM50BP56557 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM50BP56557 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM50BP56557 MIR3960-201ENST00000583311 91 ntBASIC19.93■□□□□ 0.78
TMEM50BP56557 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM50BP56557 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM50BP56557 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM50BP56557 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TMEM50BP56557 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
TMEM50BP56557 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 AC012676.1-201ENST00000574705 1949 ntBASIC19.92■□□□□ 0.78
TMEM50BP56557 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM50BP56557 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 AC060814.1-201ENST00000554326 538 ntBASIC19.92■□□□□ 0.78
TMEM50BP56557 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM50BP56557 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TMEM50BP56557 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM50BP56557 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM50BP56557 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM50BP56557 AC068473.5-201ENST00000616428 2072 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms