Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP1B3P54709 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP1B3P54709 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP1B3P54709 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP1B3P54709 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ATP1B3P54709 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP1B3P54709 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP1B3P54709 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP1B3P54709 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP1B3P54709 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP1B3P54709 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP1B3P54709 AP003733.4-201ENST00000623785 1697 ntBASIC20.33■□□□□ 0.85
ATP1B3P54709 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
ATP1B3P54709 AC093536.1-201ENST00000569153 554 ntBASIC20.33■□□□□ 0.85
ATP1B3P54709 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP1B3P54709 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP1B3P54709 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP1B3P54709 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP1B3P54709 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATP1B3P54709 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP1B3P54709 SLC6A10P-202ENST00000431994 2058 ntBASIC20.32■□□□□ 0.84
ATP1B3P54709 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP1B3P54709 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP1B3P54709 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP1B3P54709 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP1B3P54709 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP1B3P54709 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATP1B3P54709 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP1B3P54709 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP1B3P54709 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP1B3P54709 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATP1B3P54709 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP1B3P54709 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATP1B3P54709 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ATP1B3P54709 AL139125.2-201ENST00000623134 1869 ntBASIC20.3■□□□□ 0.84
ATP1B3P54709 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.3■□□□□ 0.84
ATP1B3P54709 MIR4449-201ENST00000578365 66 ntBASIC20.3■□□□□ 0.84
ATP1B3P54709 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATP1B3P54709 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP1B3P54709 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.29■□□□□ 0.84
ATP1B3P54709 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATP1B3P54709 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP1B3P54709 AC007029.1-201ENST00000604183 313 ntBASIC20.29■□□□□ 0.84
ATP1B3P54709 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP1B3P54709 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP1B3P54709 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATP1B3P54709 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP1B3P54709 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ATP1B3P54709 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.28■□□□□ 0.84
ATP1B3P54709 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.28■□□□□ 0.84
ATP1B3P54709 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATP1B3P54709 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATP1B3P54709 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP1B3P54709 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATP1B3P54709 GPX1-201ENST00000419349 1106 ntBASIC20.27■□□□□ 0.84
ATP1B3P54709 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP1B3P54709 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP1B3P54709 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.27■□□□□ 0.84
ATP1B3P54709 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP1B3P54709 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.27■□□□□ 0.83
ATP1B3P54709 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP1B3P54709 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ATP1B3P54709 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP1B3P54709 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP1B3P54709 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP1B3P54709 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP1B3P54709 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP1B3P54709 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
ATP1B3P54709 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP1B3P54709 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP1B3P54709 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATP1B3P54709 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP1B3P54709 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP1B3P54709 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP1B3P54709 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP1B3P54709 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP1B3P54709 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
ATP1B3P54709 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ATP1B3P54709 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP1B3P54709 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP1B3P54709 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP1B3P54709 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATP1B3P54709 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP1B3P54709 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP1B3P54709 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms