Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.95■■□□□ 1.1
SMSP52788 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.95■■□□□ 1.1
SMSP52788 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMSP52788 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMSP52788 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.95■■□□□ 1.1
SMSP52788 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
SMSP52788 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SMSP52788 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.94■■□□□ 1.1
SMSP52788 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.94■■□□□ 1.1
SMSP52788 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMSP52788 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.94■■□□□ 1.1
SMSP52788 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMSP52788 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMSP52788 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMSP52788 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMSP52788 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMSP52788 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.93■■□□□ 1.1
SMSP52788 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SMSP52788 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.93■■□□□ 1.1
SMSP52788 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.93■■□□□ 1.1
SMSP52788 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SMSP52788 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SMSP52788 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SMSP52788 AL592295.1-201ENST00000400984 884 ntBASIC21.92■■□□□ 1.1
SMSP52788 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.92■■□□□ 1.1
SMSP52788 AC138932.3-201ENST00000567634 1902 ntBASIC21.92■■□□□ 1.1
SMSP52788 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMSP52788 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMSP52788 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMSP52788 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMSP52788 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMSP52788 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMSP52788 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMSP52788 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMSP52788 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 AC131212.1-201ENST00000613771 668 ntBASIC21.9■■□□□ 1.1
SMSP52788 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 AC096887.2-201ENST00000623443 1957 ntBASIC21.9■■□□□ 1.1
SMSP52788 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMSP52788 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.89■■□□□ 1.09
SMSP52788 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
SMSP52788 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMSP52788 AC103834.1-201ENST00000520383 144 ntBASIC21.89■■□□□ 1.09
SMSP52788 MIR4508-201ENST00000584178 70 ntBASIC21.89■■□□□ 1.09
SMSP52788 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMSP52788 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
SMSP52788 AL139125.2-201ENST00000623134 1869 ntBASIC21.88■■□□□ 1.09
SMSP52788 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMSP52788 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.88■■□□□ 1.09
SMSP52788 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMSP52788 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.88■■□□□ 1.09
SMSP52788 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.88■■□□□ 1.09
SMSP52788 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMSP52788 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMSP52788 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMSP52788 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.87■■□□□ 1.09
SMSP52788 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.87■■□□□ 1.09
SMSP52788 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMSP52788 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMSP52788 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.87■■□□□ 1.09
SMSP52788 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMSP52788 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMSP52788 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.86■■□□□ 1.09
SMSP52788 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
SMSP52788 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.85■■□□□ 1.09
SMSP52788 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMSP52788 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SMSP52788 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.84■■□□□ 1.09
SMSP52788 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.84■■□□□ 1.09
SMSP52788 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMSP52788 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.84■■□□□ 1.09
SMSP52788 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.84■■□□□ 1.09
SMSP52788 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMSP52788 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMSP52788 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMSP52788 GUSBP5-201ENST00000418136 578 ntBASIC21.83■■□□□ 1.09
SMSP52788 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.83■■□□□ 1.09
SMSP52788 AL031848.2-201ENST00000607670 837 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms