Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF144AP50876 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.84■■□□□ 1.09
RNF144AP50876 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RNF144AP50876 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RNF144AP50876 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF144AP50876 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF144AP50876 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RNF144AP50876 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF144AP50876 DUX4L18-201ENST00000553347 1267 ntBASIC21.83■■□□□ 1.09
RNF144AP50876 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF144AP50876 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.83■■□□□ 1.08
RNF144AP50876 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RNF144AP50876 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF144AP50876 AC142381.3-201ENST00000568208 1670 ntBASIC21.82■■□□□ 1.08
RNF144AP50876 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RNF144AP50876 AC129492.7-201ENST00000622992 756 ntBASIC21.82■■□□□ 1.08
RNF144AP50876 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF144AP50876 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF144AP50876 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RNF144AP50876 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF144AP50876 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF144AP50876 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF144AP50876 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RNF144AP50876 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF144AP50876 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF144AP50876 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF144AP50876 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF144AP50876 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF144AP50876 NTF6A-201ENST00000591175 560 ntBASIC21.8■■□□□ 1.08
RNF144AP50876 AC018755.3-202ENST00000596210 929 ntBASIC21.8■■□□□ 1.08
RNF144AP50876 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF144AP50876 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF144AP50876 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF144AP50876 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF144AP50876 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF144AP50876 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF144AP50876 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF144AP50876 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF144AP50876 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF144AP50876 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF144AP50876 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF144AP50876 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF144AP50876 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF144AP50876 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF144AP50876 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF144AP50876 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF144AP50876 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF144AP50876 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF144AP50876 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RNF144AP50876 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF144AP50876 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF144AP50876 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.77■■□□□ 1.07
RNF144AP50876 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF144AP50876 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF144AP50876 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF144AP50876 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF144AP50876 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF144AP50876 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RNF144AP50876 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF144AP50876 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF144AP50876 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF144AP50876 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF144AP50876 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF144AP50876 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF144AP50876 MIR6765-201ENST00000614092 87 ntBASIC21.75■■□□□ 1.07
RNF144AP50876 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF144AP50876 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF144AP50876 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF144AP50876 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF144AP50876 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF144AP50876 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF144AP50876 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF144AP50876 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF144AP50876 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RNF144AP50876 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF144AP50876 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RNF144AP50876 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RNF144AP50876 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF144AP50876 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF144AP50876 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF144AP50876 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF144AP50876 RPS2P7-201ENST00000447334 885 ntBASIC21.72■■□□□ 1.07
RNF144AP50876 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RNF144AP50876 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RNF144AP50876 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.72■■□□□ 1.07
RNF144AP50876 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF144AP50876 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF144AP50876 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF144AP50876 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF144AP50876 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF144AP50876 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF144AP50876 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF144AP50876 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF144AP50876 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms