Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.76■□□□□ 0.91
SRP9P49458 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.76■□□□□ 0.91
SRP9P49458 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRP9P49458 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRP9P49458 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.75■□□□□ 0.91
SRP9P49458 AC007029.1-201ENST00000604183 313 ntBASIC20.75■□□□□ 0.91
SRP9P49458 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRP9P49458 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRP9P49458 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SRP9P49458 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SRP9P49458 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRP9P49458 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRP9P49458 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.74■□□□□ 0.91
SRP9P49458 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.74■□□□□ 0.91
SRP9P49458 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SRP9P49458 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP9P49458 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SRP9P49458 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP9P49458 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP9P49458 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SRP9P49458 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP9P49458 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.74■□□□□ 0.91
SRP9P49458 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRP9P49458 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.74■□□□□ 0.91
SRP9P49458 LINC01124-201ENST00000409786 2117 ntBASIC20.74■□□□□ 0.91
SRP9P49458 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRP9P49458 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRP9P49458 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.73■□□□□ 0.91
SRP9P49458 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP9P49458 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP9P49458 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRP9P49458 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SRP9P49458 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SRP9P49458 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRP9P49458 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SRP9P49458 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRP9P49458 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SRP9P49458 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SRP9P49458 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SRP9P49458 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SRP9P49458 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRP9P49458 RP9P-202ENST00000450133 1212 ntBASIC20.72■□□□□ 0.91
SRP9P49458 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SRP9P49458 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.72■□□□□ 0.91
SRP9P49458 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
SRP9P49458 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.72■□□□□ 0.91
SRP9P49458 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SRP9P49458 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SRP9P49458 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRP9P49458 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SRP9P49458 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.71■□□□□ 0.91
SRP9P49458 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.71■□□□□ 0.91
SRP9P49458 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRP9P49458 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.71■□□□□ 0.91
SRP9P49458 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SRP9P49458 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP9P49458 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRP9P49458 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.7■□□□□ 0.9
SRP9P49458 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP9P49458 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP9P49458 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRP9P49458 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRP9P49458 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SRP9P49458 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP9P49458 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
SRP9P49458 AC079834.2-201ENST00000609776 1949 ntBASIC20.69■□□□□ 0.9
SRP9P49458 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP9P49458 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.69■□□□□ 0.9
SRP9P49458 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP9P49458 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP9P49458 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.69■□□□□ 0.9
SRP9P49458 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP9P49458 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRP9P49458 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.68■□□□□ 0.9
SRP9P49458 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRP9P49458 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.68■□□□□ 0.9
SRP9P49458 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.68■□□□□ 0.9
SRP9P49458 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.68■□□□□ 0.9
SRP9P49458 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRP9P49458 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SRP9P49458 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.67■□□□□ 0.9
SRP9P49458 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP9P49458 AC093536.1-201ENST00000569153 554 ntBASIC20.67■□□□□ 0.9
SRP9P49458 ABHD17AP5-201ENST00000580133 923 ntBASIC20.67■□□□□ 0.9
SRP9P49458 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRP9P49458 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SRP9P49458 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.67■□□□□ 0.9
SRP9P49458 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
SRP9P49458 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.66■□□□□ 0.9
SRP9P49458 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SRP9P49458 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRP9P49458 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.66■□□□□ 0.9
SRP9P49458 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.66■□□□□ 0.9
SRP9P49458 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRP9P49458 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SRP9P49458 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRP9P49458 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRP9P49458 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP9P49458 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms