Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SLC1A6P48664 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC1A6P48664 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC1A6P48664 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SLC1A6P48664 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC1A6P48664 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC1A6P48664 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC1A6P48664 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC1A6P48664 RPS2P35-201ENST00000443417 897 ntBASIC23.18■■□□□ 1.3
SLC1A6P48664 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC1A6P48664 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC1A6P48664 AC004812.2-201ENST00000611079 2094 ntBASIC23.18■■□□□ 1.3
SLC1A6P48664 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC1A6P48664 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC1A6P48664 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SLC1A6P48664 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC1A6P48664 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC1A6P48664 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SLC1A6P48664 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC1A6P48664 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC1A6P48664 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.16■■□□□ 1.3
SLC1A6P48664 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC1A6P48664 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC1A6P48664 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SLC1A6P48664 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC1A6P48664 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.15■■□□□ 1.3
SLC1A6P48664 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SLC1A6P48664 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
SLC1A6P48664 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC1A6P48664 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC1A6P48664 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.14■■□□□ 1.3
SLC1A6P48664 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.14■■□□□ 1.3
SLC1A6P48664 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
SLC1A6P48664 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.14■■□□□ 1.29
SLC1A6P48664 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC1A6P48664 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC1A6P48664 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC1A6P48664 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC1A6P48664 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC1A6P48664 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC1A6P48664 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC1A6P48664 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC1A6P48664 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.13■■□□□ 1.29
SLC1A6P48664 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC1A6P48664 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC1A6P48664 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SLC1A6P48664 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SLC1A6P48664 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC1A6P48664 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.12■■□□□ 1.29
SLC1A6P48664 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC1A6P48664 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC1A6P48664 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SLC1A6P48664 ZNRF2P2-203ENST00000454624 420 ntBASIC23.12■■□□□ 1.29
SLC1A6P48664 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC1A6P48664 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SLC1A6P48664 DUSP8P5-201ENST00000422884 1815 ntBASIC23.12■■□□□ 1.29
SLC1A6P48664 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC1A6P48664 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC1A6P48664 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC1A6P48664 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC1A6P48664 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC1A6P48664 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC1A6P48664 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC1A6P48664 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SLC1A6P48664 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC1A6P48664 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC1A6P48664 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC1A6P48664 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC1A6P48664 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC1A6P48664 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC1A6P48664 CR559946.2-201ENST00000623684 991 ntBASIC23.1■■□□□ 1.29
SLC1A6P48664 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC1A6P48664 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SLC1A6P48664 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC1A6P48664 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC1A6P48664 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC1A6P48664 MIR6089-201ENST00000616698 64 ntBASIC23.09■■□□□ 1.29
SLC1A6P48664 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC1A6P48664 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC1A6P48664 ABCB10P4-201ENST00000566803 2184 ntBASIC23.08■■□□□ 1.29
SLC1A6P48664 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC1A6P48664 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.08■■□□□ 1.29
SLC1A6P48664 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.08■■□□□ 1.29
SLC1A6P48664 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC1A6P48664 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC1A6P48664 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
SLC1A6P48664 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC1A6P48664 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.08■■□□□ 1.28
SLC1A6P48664 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SLC1A6P48664 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC1A6P48664 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC1A6P48664 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SLC1A6P48664 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC1A6P48664 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms