Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.43■□□□□ 0.86
GDNFP39905 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GDNFP39905 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDNFP39905 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.42■□□□□ 0.86
GDNFP39905 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDNFP39905 CLDN5-201ENST00000403084 2357 ntBASIC20.42■□□□□ 0.86
GDNFP39905 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDNFP39905 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDNFP39905 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.42■□□□□ 0.86
GDNFP39905 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.42■□□□□ 0.86
GDNFP39905 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.42■□□□□ 0.86
GDNFP39905 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GDNFP39905 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.41■□□□□ 0.86
GDNFP39905 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
GDNFP39905 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDNFP39905 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDNFP39905 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDNFP39905 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.4■□□□□ 0.86
GDNFP39905 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDNFP39905 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
GDNFP39905 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
GDNFP39905 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDNFP39905 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
GDNFP39905 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
GDNFP39905 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDNFP39905 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GDNFP39905 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDNFP39905 MIR639-201ENST00000384974 98 ntBASIC20.39■□□□□ 0.85
GDNFP39905 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GDNFP39905 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
GDNFP39905 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDNFP39905 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDNFP39905 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GDNFP39905 AC141586.4-201ENST00000624558 1573 ntBASIC20.38■□□□□ 0.85
GDNFP39905 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDNFP39905 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDNFP39905 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.37■□□□□ 0.85
GDNFP39905 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.37■□□□□ 0.85
GDNFP39905 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDNFP39905 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GDNFP39905 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GDNFP39905 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDNFP39905 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GDNFP39905 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDNFP39905 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GDNFP39905 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.36■□□□□ 0.85
GDNFP39905 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GDNFP39905 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.36■□□□□ 0.85
GDNFP39905 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.35■□□□□ 0.85
GDNFP39905 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
GDNFP39905 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GDNFP39905 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.35■□□□□ 0.85
GDNFP39905 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GDNFP39905 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDNFP39905 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDNFP39905 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDNFP39905 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDNFP39905 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDNFP39905 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.34■□□□□ 0.85
GDNFP39905 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.34■□□□□ 0.85
GDNFP39905 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDNFP39905 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GDNFP39905 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.33■□□□□ 0.85
GDNFP39905 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDNFP39905 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDNFP39905 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDNFP39905 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDNFP39905 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
GDNFP39905 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.33■□□□□ 0.84
GDNFP39905 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDNFP39905 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDNFP39905 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms