Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 MRPS16YPL013C 366 nt5.6□□□□□ -1.51
TDA11P38854 RAT1YOR048C 3021 nt5.59□□□□□ -1.51
TDA11P38854 MSN2YMR037C 2115 nt5.59□□□□□ -1.51
TDA11P38854 YDL218WYDL218W 954 nt5.59□□□□□ -1.51
TDA11P38854 LDS1YAL018C 978 nt5.59□□□□□ -1.51
TDA11P38854 PGA2YNL149C 390 nt5.59□□□□□ -1.51
TDA11P38854 TAX4YJL083W 1815 nt5.59□□□□□ -1.51
TDA11P38854 ACC1YNR016C 6702 nt5.59□□□□□ -1.52
TDA11P38854 OCA5YHL029C 2040 nt5.58□□□□□ -1.52
TDA11P38854 MAK31YCR020C-A 267 nt5.58□□□□□ -1.52
TDA11P38854 YDL121CYDL121C 450 nt5.58□□□□□ -1.52
TDA11P38854 PHB1YGR132C 864 nt5.58□□□□□ -1.52
TDA11P38854 MRPL15YLR312W-A 762 nt5.58□□□□□ -1.52
TDA11P38854 COX11YPL132W 903 nt5.58□□□□□ -1.52
TDA11P38854 EMW1YNL313C 2715 nt5.58□□□□□ -1.52
TDA11P38854 SSZ1YHR064C 1617 nt5.57□□□□□ -1.52
TDA11P38854 DOT5YIL010W 648 nt5.57□□□□□ -1.52
TDA11P38854 PHO86YJL117W 936 nt5.57□□□□□ -1.52
TDA11P38854 FAT3YKL187C 2253 nt5.57□□□□□ -1.52
TDA11P38854 SIT4YDL047W 936 nt5.56□□□□□ -1.52
TDA11P38854 YDR015CYDR015C 240 nt5.56□□□□□ -1.52
TDA11P38854 DJP1YIR004W 1299 nt5.56□□□□□ -1.52
TDA11P38854 CDC11YJR076C 1248 nt5.56□□□□□ -1.52
TDA11P38854 PUS5YLR165C 765 nt5.56□□□□□ -1.52
TDA11P38854 MLC2YPR188C 492 nt5.56□□□□□ -1.52
TDA11P38854 YML082WYML082W 1950 nt5.56□□□□□ -1.52
TDA11P38854 FET3YMR058W 1911 nt5.55□□□□□ -1.52
TDA11P38854 SUP19tS(UGA)E 82 nt5.55□□□□□ -1.52
TDA11P38854 SUP17tS(UGA)I 82 nt5.55□□□□□ -1.52
TDA11P38854 SUP16tS(UGA)P 82 nt5.55□□□□□ -1.52
TDA11P38854 MDY2YOL111C 639 nt5.55□□□□□ -1.52
TDA11P38854 YET3YDL072C 612 nt5.54□□□□□ -1.52
TDA11P38854 YDR034W-BYDR034W-B 156 nt5.54□□□□□ -1.52
TDA11P38854 LYS12YIL094C 1116 nt5.54□□□□□ -1.52
TDA11P38854 HAP3YBL021C 435 nt5.54□□□□□ -1.52
TDA11P38854 YDR109CYDR109C 2148 nt5.54□□□□□ -1.52
TDA11P38854 VNX1YNL321W 2727 nt5.54□□□□□ -1.52
TDA11P38854 GRS1YBR121C 2004 nt5.53□□□□□ -1.52
TDA11P38854 HFI1YPL254W 1467 nt5.53□□□□□ -1.52
TDA11P38854 GLO2YDR272W 825 nt5.53□□□□□ -1.52
TDA11P38854 SEC20YDR498C 1152 nt5.53□□□□□ -1.52
TDA11P38854 YKR041WYKR041W 753 nt5.53□□□□□ -1.52
TDA11P38854 ECM19YLR390W 339 nt5.53□□□□□ -1.52
TDA11P38854 HXT3YDR345C 1704 nt5.53□□□□□ -1.52
TDA11P38854 BNA5YLR231C 1362 nt5.53□□□□□ -1.52
TDA11P38854 ATE1YGL017W 1512 nt5.53□□□□□ -1.52
TDA11P38854 HXT17YNR072W 1695 nt5.53□□□□□ -1.52
TDA11P38854 PIF1YML061C 2580 nt5.53□□□□□ -1.52
TDA11P38854 YDL023CYDL023C 321 nt5.52□□□□□ -1.53
TDA11P38854 NQM1YGR043C 1002 nt5.52□□□□□ -1.53
TDA11P38854 YIR020W-AYIR020W-A 243 nt5.52□□□□□ -1.53
TDA11P38854 SKS1YPL026C 1509 nt5.52□□□□□ -1.53
TDA11P38854 VHS1YDR247W 1386 nt5.52□□□□□ -1.53
TDA11P38854 DPH2YKL191W 1605 nt5.52□□□□□ -1.53
TDA11P38854 BIT2YBR270C 1638 nt5.52□□□□□ -1.53
TDA11P38854 RAD24YER173W 1980 nt5.51□□□□□ -1.53
TDA11P38854 ECM3YOR092W 1842 nt5.51□□□□□ -1.53
TDA11P38854 DUG1YFR044C 1446 nt5.51□□□□□ -1.53
TDA11P38854 EGD2YHR193C 525 nt5.51□□□□□ -1.53
TDA11P38854 RPS5YJR123W 678 nt5.51□□□□□ -1.53
TDA11P38854 GCV3YAL044C 513 nt5.51□□□□□ -1.53
TDA11P38854 JNM1YMR294W 1122 nt5.51□□□□□ -1.53
TDA11P38854 YNL165WYNL165W 1221 nt5.51□□□□□ -1.53
TDA11P38854 ENV7YPL236C 1095 nt5.51□□□□□ -1.53
TDA11P38854 EXO1YOR033C 2109 nt5.5□□□□□ -1.53
TDA11P38854 APE3YBR286W 1614 nt5.5□□□□□ -1.53
TDA11P38854 SHP1YBL058W 1272 nt5.5□□□□□ -1.53
TDA11P38854 YPR160C-AYPR160C-A 285 nt5.5□□□□□ -1.53
TDA11P38854 IME2YJL106W 1938 nt5.5□□□□□ -1.53
TDA11P38854 YDL172CYDL172C 480 nt5.49□□□□□ -1.53
TDA11P38854 MRF1YGL143C 1242 nt5.49□□□□□ -1.53
TDA11P38854 SYF2YGR129W 648 nt5.49□□□□□ -1.53
TDA11P38854 NHA1YLR138W 2958 nt5.49□□□□□ -1.53
TDA11P38854 CAF40YNL288W 1122 nt5.49□□□□□ -1.53
TDA11P38854 CAM1YPL048W 1248 nt5.49□□□□□ -1.53
TDA11P38854 PAP2YOL115W 1755 nt5.49□□□□□ -1.53
TDA11P38854 BAP2YBR068C 1830 nt5.48□□□□□ -1.53
TDA11P38854 VPS1YKR001C 2115 nt5.48□□□□□ -1.53
TDA11P38854 PMT2YAL023C 2280 nt5.48□□□□□ -1.53
TDA11P38854 SLT2YHR030C 1455 nt5.48□□□□□ -1.53
TDA11P38854 ATO3YDR384C 828 nt5.48□□□□□ -1.53
TDA11P38854 YDR401WYDR401W 564 nt5.48□□□□□ -1.53
TDA11P38854 CDC43YGL155W 1131 nt5.48□□□□□ -1.53
TDA11P38854 ERP5YHR110W 639 nt5.48□□□□□ -1.53
TDA11P38854 YLR126CYLR126C 756 nt5.48□□□□□ -1.53
TDA11P38854 HCR1YLR192C 798 nt5.48□□□□□ -1.53
TDA11P38854 YBL044WYBL044W 369 nt5.48□□□□□ -1.53
TDA11P38854 YPL102CYPL102C 303 nt5.48□□□□□ -1.53
TDA11P38854 YNL095CYNL095C 1929 nt5.48□□□□□ -1.53
TDA11P38854 IRS4YKR019C 1848 nt5.48□□□□□ -1.53
TDA11P38854 MNS1YJR131W 1650 nt5.47□□□□□ -1.53
TDA11P38854 PRS2YER099C 957 nt5.47□□□□□ -1.53
TDA11P38854 FHN1YGR131W 525 nt5.47□□□□□ -1.53
TDA11P38854 CSL4YNL232W 879 nt5.47□□□□□ -1.53
TDA11P38854 RDL2YOR286W 450 nt5.47□□□□□ -1.53
TDA11P38854 TFB4YPR056W 1017 nt5.47□□□□□ -1.53
TDA11P38854 GUF1YLR289W 1938 nt5.46□□□□□ -1.53
TDA11P38854 YDL129WYDL129W 876 nt5.46□□□□□ -1.54
TDA11P38854 YER187WYER187W 426 nt5.46□□□□□ -1.54
TDA11P38854 MTW1YAL034W-A 870 nt5.46□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms