Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.4■■□□□ 1.18
PTPN6P29350 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTPN6P29350 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.4■■□□□ 1.18
PTPN6P29350 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTPN6P29350 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTPN6P29350 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTPN6P29350 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PTPN6P29350 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PTPN6P29350 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.39■■□□□ 1.18
PTPN6P29350 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
PTPN6P29350 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTPN6P29350 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.39■■□□□ 1.17
PTPN6P29350 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTPN6P29350 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.39■■□□□ 1.17
PTPN6P29350 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.39■■□□□ 1.17
PTPN6P29350 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PTPN6P29350 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTPN6P29350 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.38■■□□□ 1.17
PTPN6P29350 MIR3960-201ENST00000583311 91 ntBASIC22.38■■□□□ 1.17
PTPN6P29350 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTPN6P29350 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTPN6P29350 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTPN6P29350 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTPN6P29350 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN6P29350 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.37■■□□□ 1.17
PTPN6P29350 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN6P29350 LINC00543-201ENST00000567234 1845 ntBASIC22.37■■□□□ 1.17
PTPN6P29350 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.37■■□□□ 1.17
PTPN6P29350 NTF6A-201ENST00000591175 560 ntBASIC22.37■■□□□ 1.17
PTPN6P29350 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN6P29350 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.37■■□□□ 1.17
PTPN6P29350 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PTPN6P29350 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTPN6P29350 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PTPN6P29350 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN6P29350 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN6P29350 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN6P29350 U85056.1-201ENST00000616429 682 ntBASIC22.36■■□□□ 1.17
PTPN6P29350 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
PTPN6P29350 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTPN6P29350 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN6P29350 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.35■■□□□ 1.17
PTPN6P29350 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN6P29350 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN6P29350 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN6P29350 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PTPN6P29350 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTPN6P29350 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PTPN6P29350 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN6P29350 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PTPN6P29350 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN6P29350 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTPN6P29350 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.34■■□□□ 1.17
PTPN6P29350 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.33■■□□□ 1.17
PTPN6P29350 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PTPN6P29350 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN6P29350 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTPN6P29350 RP9P-202ENST00000450133 1212 ntBASIC22.33■■□□□ 1.17
PTPN6P29350 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PTPN6P29350 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTPN6P29350 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTPN6P29350 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.32■■□□□ 1.16
PTPN6P29350 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.32■■□□□ 1.16
PTPN6P29350 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PTPN6P29350 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN6P29350 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTPN6P29350 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PTPN6P29350 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PTPN6P29350 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.31■■□□□ 1.16
PTPN6P29350 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN6P29350 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.3■■□□□ 1.16
PTPN6P29350 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.3■■□□□ 1.16
PTPN6P29350 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.3■■□□□ 1.16
PTPN6P29350 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PTPN6P29350 AC093536.1-201ENST00000569153 554 ntBASIC22.3■■□□□ 1.16
PTPN6P29350 MIR6089-201ENST00000616698 64 ntBASIC22.3■■□□□ 1.16
PTPN6P29350 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN6P29350 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN6P29350 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN6P29350 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN6P29350 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN6P29350 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN6P29350 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.29■■□□□ 1.16
PTPN6P29350 AC026202.3-201ENST00000600805 1127 ntBASIC22.29■■□□□ 1.16
PTPN6P29350 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms