Protein–RNA interactions for Protein: P26447

S100A4, Protein S100-A4, humanhuman

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4P26447 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
S100A4P26447 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
S100A4P26447 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.48■□□□□ 0.39
S100A4P26447 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.48■□□□□ 0.39
S100A4P26447 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.48■□□□□ 0.39
S100A4P26447 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
S100A4P26447 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.48■□□□□ 0.39
S100A4P26447 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
S100A4P26447 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
S100A4P26447 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.48■□□□□ 0.39
S100A4P26447 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
S100A4P26447 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.47■□□□□ 0.39
S100A4P26447 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.47■□□□□ 0.39
S100A4P26447 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.47■□□□□ 0.39
S100A4P26447 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 LINC01124-201ENST00000409786 2117 ntBASIC17.47■□□□□ 0.39
S100A4P26447 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
S100A4P26447 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
S100A4P26447 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
S100A4P26447 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
S100A4P26447 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
S100A4P26447 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
S100A4P26447 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
S100A4P26447 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
S100A4P26447 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
S100A4P26447 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.46■□□□□ 0.38
S100A4P26447 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
S100A4P26447 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
S100A4P26447 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.45■□□□□ 0.38
S100A4P26447 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.45■□□□□ 0.38
S100A4P26447 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.45■□□□□ 0.38
S100A4P26447 ZNRF2P2-203ENST00000454624 420 ntBASIC17.45■□□□□ 0.38
S100A4P26447 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
S100A4P26447 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
S100A4P26447 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.44■□□□□ 0.38
S100A4P26447 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.44■□□□□ 0.38
S100A4P26447 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.44■□□□□ 0.38
S100A4P26447 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S100A4P26447 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
S100A4P26447 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.43■□□□□ 0.38
S100A4P26447 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
S100A4P26447 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
S100A4P26447 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.43■□□□□ 0.38
S100A4P26447 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.43■□□□□ 0.38
S100A4P26447 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
S100A4P26447 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.43■□□□□ 0.38
S100A4P26447 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.43■□□□□ 0.38
S100A4P26447 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S100A4P26447 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
S100A4P26447 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.42■□□□□ 0.38
S100A4P26447 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
S100A4P26447 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.42■□□□□ 0.38
S100A4P26447 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
S100A4P26447 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.42■□□□□ 0.38
S100A4P26447 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms