Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL8A2P25067 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
COL8A2P25067 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL8A2P25067 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL8A2P25067 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL8A2P25067 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.98■□□□□ 0.79
COL8A2P25067 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.98■□□□□ 0.79
COL8A2P25067 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL8A2P25067 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL8A2P25067 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL8A2P25067 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.97■□□□□ 0.79
COL8A2P25067 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.97■□□□□ 0.79
COL8A2P25067 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL8A2P25067 GUSBP5-201ENST00000418136 578 ntBASIC19.97■□□□□ 0.79
COL8A2P25067 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL8A2P25067 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL8A2P25067 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.96■□□□□ 0.79
COL8A2P25067 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.96■□□□□ 0.79
COL8A2P25067 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.96■□□□□ 0.79
COL8A2P25067 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.96■□□□□ 0.79
COL8A2P25067 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL8A2P25067 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL8A2P25067 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL8A2P25067 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
COL8A2P25067 AC092803.2-201ENST00000564287 1899 ntBASIC19.95■□□□□ 0.78
COL8A2P25067 Z92544.1-202ENST00000571933 1220 ntBASIC19.95■□□□□ 0.78
COL8A2P25067 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL8A2P25067 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL8A2P25067 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL8A2P25067 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL8A2P25067 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
COL8A2P25067 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL8A2P25067 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL8A2P25067 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL8A2P25067 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL8A2P25067 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL8A2P25067 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL8A2P25067 AC010501.1-201ENST00000606270 1962 ntBASIC19.94■□□□□ 0.78
COL8A2P25067 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL8A2P25067 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL8A2P25067 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL8A2P25067 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL8A2P25067 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
COL8A2P25067 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.93■□□□□ 0.78
COL8A2P25067 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.93■□□□□ 0.78
COL8A2P25067 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL8A2P25067 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL8A2P25067 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.92■□□□□ 0.78
COL8A2P25067 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL8A2P25067 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL8A2P25067 BX664725.1-201ENST00000438252 379 ntBASIC19.92■□□□□ 0.78
COL8A2P25067 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL8A2P25067 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL8A2P25067 AC097639.1-201ENST00000565519 1891 ntBASIC19.92■□□□□ 0.78
COL8A2P25067 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL8A2P25067 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.91■□□□□ 0.78
COL8A2P25067 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL8A2P25067 FOXO3B-201ENST00000395675 1928 ntBASIC19.91■□□□□ 0.78
COL8A2P25067 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL8A2P25067 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL8A2P25067 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.9■□□□□ 0.78
COL8A2P25067 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
COL8A2P25067 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL8A2P25067 KRT125P-201ENST00000546827 989 ntBASIC19.9■□□□□ 0.78
COL8A2P25067 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.9■□□□□ 0.78
COL8A2P25067 AC137630.3-201ENST00000607245 391 ntBASIC19.9■□□□□ 0.78
COL8A2P25067 MIR4787-201ENST00000607364 84 ntBASIC19.9■□□□□ 0.78
COL8A2P25067 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL8A2P25067 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL8A2P25067 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL8A2P25067 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.9■□□□□ 0.78
COL8A2P25067 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL8A2P25067 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL8A2P25067 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL8A2P25067 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL8A2P25067 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL8A2P25067 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL8A2P25067 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL8A2P25067 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL8A2P25067 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL8A2P25067 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.88■□□□□ 0.77
COL8A2P25067 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL8A2P25067 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL8A2P25067 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.88■□□□□ 0.77
COL8A2P25067 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.88■□□□□ 0.77
COL8A2P25067 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.88■□□□□ 0.77
COL8A2P25067 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.88■□□□□ 0.77
COL8A2P25067 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL8A2P25067 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL8A2P25067 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL8A2P25067 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.87■□□□□ 0.77
COL8A2P25067 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL8A2P25067 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL8A2P25067 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms