Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.81■□□□□ 0.92
MSR1P21757 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSR1P21757 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSR1P21757 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSR1P21757 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MSR1P21757 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MSR1P21757 DUX4L9-201ENST00000449051 1259 ntBASIC20.8■□□□□ 0.92
MSR1P21757 MIR6765-201ENST00000614092 87 ntBASIC20.8■□□□□ 0.92
MSR1P21757 RPS2P7-201ENST00000447334 885 ntBASIC20.79■□□□□ 0.92
MSR1P21757 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MSR1P21757 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSR1P21757 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MSR1P21757 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MSR1P21757 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSR1P21757 AP003733.4-201ENST00000623785 1697 ntBASIC20.78■□□□□ 0.92
MSR1P21757 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSR1P21757 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.78■□□□□ 0.92
MSR1P21757 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSR1P21757 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.78■□□□□ 0.92
MSR1P21757 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.78■□□□□ 0.92
MSR1P21757 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSR1P21757 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSR1P21757 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MSR1P21757 KRT18P60-201ENST00000312876 1297 ntBASIC20.77■□□□□ 0.92
MSR1P21757 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.77■□□□□ 0.92
MSR1P21757 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MSR1P21757 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSR1P21757 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSR1P21757 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MSR1P21757 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MSR1P21757 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSR1P21757 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSR1P21757 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.76■□□□□ 0.91
MSR1P21757 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.76■□□□□ 0.91
MSR1P21757 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSR1P21757 NTF6A-201ENST00000591175 560 ntBASIC20.76■□□□□ 0.91
MSR1P21757 AC129492.7-201ENST00000622992 756 ntBASIC20.76■□□□□ 0.91
MSR1P21757 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.76■□□□□ 0.91
MSR1P21757 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
MSR1P21757 FOXO3B-201ENST00000395675 1928 ntBASIC20.76■□□□□ 0.91
MSR1P21757 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSR1P21757 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
MSR1P21757 AC135731.1-201ENST00000569415 2548 ntBASIC20.75■□□□□ 0.91
MSR1P21757 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSR1P21757 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSR1P21757 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSR1P21757 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSR1P21757 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSR1P21757 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSR1P21757 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
MSR1P21757 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSR1P21757 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSR1P21757 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSR1P21757 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MSR1P21757 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.73■□□□□ 0.91
MSR1P21757 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.73■□□□□ 0.91
MSR1P21757 AC087393.1-201ENST00000582896 145 ntBASIC20.73■□□□□ 0.91
MSR1P21757 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.73■□□□□ 0.91
MSR1P21757 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSR1P21757 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSR1P21757 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSR1P21757 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSR1P21757 MIR6089-201ENST00000616698 64 ntBASIC20.72■□□□□ 0.91
MSR1P21757 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSR1P21757 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
MSR1P21757 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
MSR1P21757 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
MSR1P21757 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
MSR1P21757 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.71■□□□□ 0.91
MSR1P21757 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MSR1P21757 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSR1P21757 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.7■□□□□ 0.9
MSR1P21757 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MSR1P21757 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSR1P21757 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.7■□□□□ 0.9
MSR1P21757 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.69■□□□□ 0.9
MSR1P21757 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
MSR1P21757 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSR1P21757 AL139125.2-201ENST00000623134 1869 ntBASIC20.69■□□□□ 0.9
MSR1P21757 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSR1P21757 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSR1P21757 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSR1P21757 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSR1P21757 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSR1P21757 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.69■□□□□ 0.9
MSR1P21757 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms