Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.68■■■□□ 2.66
CSB-PGBD3P0DP91 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.68■■■□□ 2.66
CSB-PGBD3P0DP91 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.68■■■□□ 2.66
CSB-PGBD3P0DP91 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CSB-PGBD3P0DP91 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.68■■■□□ 2.66
CSB-PGBD3P0DP91 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CSB-PGBD3P0DP91 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.67■■■□□ 2.66
CSB-PGBD3P0DP91 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.67■■■□□ 2.66
CSB-PGBD3P0DP91 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CSB-PGBD3P0DP91 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.67■■■□□ 2.66
CSB-PGBD3P0DP91 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.67■■■□□ 2.66
CSB-PGBD3P0DP91 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CSB-PGBD3P0DP91 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CSB-PGBD3P0DP91 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CSB-PGBD3P0DP91 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CSB-PGBD3P0DP91 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.65■■■□□ 2.66
CSB-PGBD3P0DP91 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CSB-PGBD3P0DP91 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CSB-PGBD3P0DP91 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CSB-PGBD3P0DP91 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.64■■■□□ 2.66
CSB-PGBD3P0DP91 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CSB-PGBD3P0DP91 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CSB-PGBD3P0DP91 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CSB-PGBD3P0DP91 AF131216.4-201ENST00000638924 1588 ntBASIC31.64■■■□□ 2.65
CSB-PGBD3P0DP91 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CSB-PGBD3P0DP91 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CSB-PGBD3P0DP91 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CSB-PGBD3P0DP91 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CSB-PGBD3P0DP91 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CSB-PGBD3P0DP91 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 AC133561.4-201ENST00000566112 224 ntBASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CSB-PGBD3P0DP91 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CSB-PGBD3P0DP91 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CSB-PGBD3P0DP91 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CSB-PGBD3P0DP91 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CSB-PGBD3P0DP91 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.6■■■□□ 2.65
CSB-PGBD3P0DP91 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CSB-PGBD3P0DP91 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CSB-PGBD3P0DP91 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CSB-PGBD3P0DP91 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.6■■■□□ 2.65
CSB-PGBD3P0DP91 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CSB-PGBD3P0DP91 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.59■■■□□ 2.65
CSB-PGBD3P0DP91 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
CSB-PGBD3P0DP91 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CSB-PGBD3P0DP91 TFPT-201ENST00000391757 774 ntTSL 5 BASIC31.58■■■□□ 2.65
CSB-PGBD3P0DP91 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CSB-PGBD3P0DP91 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CSB-PGBD3P0DP91 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC31.58■■■□□ 2.65
CSB-PGBD3P0DP91 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CSB-PGBD3P0DP91 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 PBX2P1-201ENST00000493219 1291 ntBASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CSB-PGBD3P0DP91 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.55■■■□□ 2.64
CSB-PGBD3P0DP91 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
CSB-PGBD3P0DP91 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CSB-PGBD3P0DP91 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CSB-PGBD3P0DP91 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CSB-PGBD3P0DP91 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CSB-PGBD3P0DP91 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CSB-PGBD3P0DP91 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CSB-PGBD3P0DP91 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CSB-PGBD3P0DP91 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CSB-PGBD3P0DP91 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.52■■■□□ 2.64
CSB-PGBD3P0DP91 FOXO3B-201ENST00000395675 1928 ntBASIC31.51■■■□□ 2.64
CSB-PGBD3P0DP91 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CSB-PGBD3P0DP91 ZNRF2P3-201ENST00000424200 374 ntBASIC31.51■■■□□ 2.63
CSB-PGBD3P0DP91 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.51■■■□□ 2.63
CSB-PGBD3P0DP91 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.51■■■□□ 2.63
CSB-PGBD3P0DP91 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CSB-PGBD3P0DP91 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 AC106739.1-201ENST00000617035 715 ntBASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CSB-PGBD3P0DP91 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CSB-PGBD3P0DP91 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
CSB-PGBD3P0DP91 AC142381.2-201ENST00000566120 298 ntBASIC31.49■■■□□ 2.63
CSB-PGBD3P0DP91 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CSB-PGBD3P0DP91 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms