Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.75■□□□□ 0.43
LTAP01374 AL162393.1-201ENST00000437852 946 ntBASIC17.75■□□□□ 0.43
LTAP01374 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.75■□□□□ 0.43
LTAP01374 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.75■□□□□ 0.43
LTAP01374 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LTAP01374 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.74■□□□□ 0.43
LTAP01374 ABCB10P4-201ENST00000566803 2184 ntBASIC17.74■□□□□ 0.43
LTAP01374 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.74■□□□□ 0.43
LTAP01374 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.73■□□□□ 0.43
LTAP01374 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.73■□□□□ 0.43
LTAP01374 MIR6089-201ENST00000616698 64 ntBASIC17.73■□□□□ 0.43
LTAP01374 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LTAP01374 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LTAP01374 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.72■□□□□ 0.43
LTAP01374 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.72■□□□□ 0.43
LTAP01374 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LTAP01374 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.72■□□□□ 0.43
LTAP01374 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LTAP01374 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LTAP01374 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LTAP01374 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LTAP01374 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LTAP01374 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LTAP01374 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LTAP01374 LINC01971-201ENST00000617888 1048 ntBASIC17.71■□□□□ 0.43
LTAP01374 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LTAP01374 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.71■□□□□ 0.43
LTAP01374 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LTAP01374 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LTAP01374 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.7■□□□□ 0.42
LTAP01374 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LTAP01374 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.7■□□□□ 0.42
LTAP01374 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LTAP01374 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.7■□□□□ 0.42
LTAP01374 DUX4L13-201ENST00000554103 1267 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L15-201ENST00000611059 1267 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L23-201ENST00000615195 1269 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L24-201ENST00000617576 1269 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L22-201ENST00000618238 1269 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L20-201ENST00000619712 1269 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L21-201ENST00000622058 1269 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L10-201ENST00000622460 1267 ntBASIC17.7■□□□□ 0.42
LTAP01374 DUX4L25-201ENST00000624915 1269 ntBASIC17.7■□□□□ 0.42
LTAP01374 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.7■□□□□ 0.42
LTAP01374 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LTAP01374 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LTAP01374 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.69■□□□□ 0.42
LTAP01374 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.69■□□□□ 0.42
LTAP01374 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LTAP01374 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.69■□□□□ 0.42
LTAP01374 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LTAP01374 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LTAP01374 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.69■□□□□ 0.42
LTAP01374 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LTAP01374 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LTAP01374 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.68■□□□□ 0.42
LTAP01374 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.68■□□□□ 0.42
LTAP01374 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LTAP01374 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LTAP01374 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.67■□□□□ 0.42
LTAP01374 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.67■□□□□ 0.42
LTAP01374 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LTAP01374 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LTAP01374 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
LTAP01374 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms