Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
UPK1BO75841 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.64■□□□□ 0.9
UPK1BO75841 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.64■□□□□ 0.9
UPK1BO75841 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.64■□□□□ 0.89
UPK1BO75841 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPK1BO75841 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.64■□□□□ 0.89
UPK1BO75841 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPK1BO75841 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.64■□□□□ 0.89
UPK1BO75841 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK1BO75841 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UPK1BO75841 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK1BO75841 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
UPK1BO75841 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.63■□□□□ 0.89
UPK1BO75841 AC007375.3-201ENST00000600936 2314 ntBASIC20.63■□□□□ 0.89
UPK1BO75841 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.63■□□□□ 0.89
UPK1BO75841 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.63■□□□□ 0.89
UPK1BO75841 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK1BO75841 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK1BO75841 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.62■□□□□ 0.89
UPK1BO75841 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UPK1BO75841 LINC00526-201ENST00000581067 1875 ntBASIC20.62■□□□□ 0.89
UPK1BO75841 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK1BO75841 AC127496.7-201ENST00000625110 1798 ntBASIC20.62■□□□□ 0.89
UPK1BO75841 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPK1BO75841 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPK1BO75841 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
UPK1BO75841 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.61■□□□□ 0.89
UPK1BO75841 SLC6A10P-202ENST00000431994 2058 ntBASIC20.61■□□□□ 0.89
UPK1BO75841 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPK1BO75841 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UPK1BO75841 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPK1BO75841 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.61■□□□□ 0.89
UPK1BO75841 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPK1BO75841 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
UPK1BO75841 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UPK1BO75841 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.6■□□□□ 0.89
UPK1BO75841 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.6■□□□□ 0.89
UPK1BO75841 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UPK1BO75841 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
UPK1BO75841 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK1BO75841 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.59■□□□□ 0.89
UPK1BO75841 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.59■□□□□ 0.89
UPK1BO75841 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.59■□□□□ 0.89
UPK1BO75841 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.59■□□□□ 0.89
UPK1BO75841 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
UPK1BO75841 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.59■□□□□ 0.89
UPK1BO75841 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK1BO75841 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
UPK1BO75841 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK1BO75841 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.59■□□□□ 0.89
UPK1BO75841 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK1BO75841 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK1BO75841 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.59■□□□□ 0.89
UPK1BO75841 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPK1BO75841 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPK1BO75841 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPK1BO75841 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
UPK1BO75841 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPK1BO75841 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPK1BO75841 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.58■□□□□ 0.88
UPK1BO75841 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPK1BO75841 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPK1BO75841 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UPK1BO75841 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1BO75841 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1BO75841 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK1BO75841 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.56■□□□□ 0.88
UPK1BO75841 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1BO75841 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPK1BO75841 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
UPK1BO75841 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UPK1BO75841 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1BO75841 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1BO75841 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.55■□□□□ 0.88
UPK1BO75841 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1BO75841 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
UPK1BO75841 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK1BO75841 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UPK1BO75841 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1BO75841 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
UPK1BO75841 ZNRF2P1-201ENST00000441407 443 ntBASIC20.54■□□□□ 0.88
UPK1BO75841 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1BO75841 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPK1BO75841 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UPK1BO75841 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1BO75841 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1BO75841 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK1BO75841 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms