Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PFDN1O60925 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PFDN1O60925 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.22■□□□□ 0.99
PFDN1O60925 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.21■□□□□ 0.99
PFDN1O60925 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PFDN1O60925 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN1O60925 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN1O60925 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PFDN1O60925 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN1O60925 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PFDN1O60925 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.2■□□□□ 0.98
PFDN1O60925 AC233723.2-201ENST00000623798 2106 ntBASIC21.2■□□□□ 0.98
PFDN1O60925 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN1O60925 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PFDN1O60925 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PFDN1O60925 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.19■□□□□ 0.98
PFDN1O60925 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PFDN1O60925 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PFDN1O60925 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.18■□□□□ 0.98
PFDN1O60925 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.18■□□□□ 0.98
PFDN1O60925 AC092667.1-201ENST00000434301 2586 ntBASIC21.18■□□□□ 0.98
PFDN1O60925 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN1O60925 WHAMMP2-203ENST00000563942 1603 ntBASIC21.18■□□□□ 0.98
PFDN1O60925 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN1O60925 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PFDN1O60925 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN1O60925 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN1O60925 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN1O60925 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
PFDN1O60925 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PFDN1O60925 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN1O60925 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN1O60925 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PFDN1O60925 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN1O60925 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN1O60925 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN1O60925 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
PFDN1O60925 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN1O60925 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PFDN1O60925 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.16■□□□□ 0.98
PFDN1O60925 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN1O60925 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN1O60925 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN1O60925 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.15■□□□□ 0.98
PFDN1O60925 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
PFDN1O60925 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PFDN1O60925 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN1O60925 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PFDN1O60925 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.15■□□□□ 0.98
PFDN1O60925 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN1O60925 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PFDN1O60925 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.14■□□□□ 0.98
PFDN1O60925 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PFDN1O60925 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.14■□□□□ 0.97
PFDN1O60925 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PFDN1O60925 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.14■□□□□ 0.97
PFDN1O60925 AL137060.1-201ENST00000618151 2648 ntBASIC21.14■□□□□ 0.97
PFDN1O60925 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PFDN1O60925 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PFDN1O60925 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PFDN1O60925 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PFDN1O60925 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PFDN1O60925 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PFDN1O60925 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PFDN1O60925 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.13■□□□□ 0.97
PFDN1O60925 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PFDN1O60925 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PFDN1O60925 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PFDN1O60925 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.13■□□□□ 0.97
PFDN1O60925 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.13■□□□□ 0.97
PFDN1O60925 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PFDN1O60925 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.12■□□□□ 0.97
PFDN1O60925 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
PFDN1O60925 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PFDN1O60925 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.12■□□□□ 0.97
PFDN1O60925 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PFDN1O60925 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
PFDN1O60925 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.11■□□□□ 0.97
PFDN1O60925 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PFDN1O60925 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PFDN1O60925 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms