Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.14■■□□□ 1.62
TBC1D4O60343 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.14■■□□□ 1.62
TBC1D4O60343 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.14■■□□□ 1.62
TBC1D4O60343 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
TBC1D4O60343 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D4O60343 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.13■■□□□ 1.61
TBC1D4O60343 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.13■■□□□ 1.61
TBC1D4O60343 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D4O60343 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D4O60343 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TBC1D4O60343 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TBC1D4O60343 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TBC1D4O60343 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.12■■□□□ 1.61
TBC1D4O60343 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.12■■□□□ 1.61
TBC1D4O60343 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TBC1D4O60343 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TBC1D4O60343 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TBC1D4O60343 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TBC1D4O60343 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D4O60343 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D4O60343 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D4O60343 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.11■■□□□ 1.61
TBC1D4O60343 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D4O60343 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.11■■□□□ 1.61
TBC1D4O60343 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.11■■□□□ 1.61
TBC1D4O60343 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.11■■□□□ 1.61
TBC1D4O60343 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.11■■□□□ 1.61
TBC1D4O60343 FOXO3B-201ENST00000395675 1928 ntBASIC25.11■■□□□ 1.61
TBC1D4O60343 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.11■■□□□ 1.61
TBC1D4O60343 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D4O60343 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TBC1D4O60343 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
TBC1D4O60343 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TBC1D4O60343 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
TBC1D4O60343 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D4O60343 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.09■■□□□ 1.61
TBC1D4O60343 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
TBC1D4O60343 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.09■■□□□ 1.61
TBC1D4O60343 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D4O60343 MIR935-201ENST00000401179 91 ntBASIC25.09■■□□□ 1.61
TBC1D4O60343 AC092028.1-203ENST00000608262 953 ntBASIC25.09■■□□□ 1.61
TBC1D4O60343 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
TBC1D4O60343 AL121749.1-202ENST00000609313 2153 ntBASIC25.09■■□□□ 1.61
TBC1D4O60343 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.09■■□□□ 1.61
TBC1D4O60343 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D4O60343 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D4O60343 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.09■■□□□ 1.61
TBC1D4O60343 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.08■■□□□ 1.61
TBC1D4O60343 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.08■■□□□ 1.61
TBC1D4O60343 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.08■■□□□ 1.61
TBC1D4O60343 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.08■■□□□ 1.61
TBC1D4O60343 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.08■■□□□ 1.61
TBC1D4O60343 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D4O60343 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TBC1D4O60343 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TBC1D4O60343 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TBC1D4O60343 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TBC1D4O60343 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.06■■□□□ 1.6
TBC1D4O60343 AC010501.1-201ENST00000606270 1962 ntBASIC25.06■■□□□ 1.6
TBC1D4O60343 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.06■■□□□ 1.6
TBC1D4O60343 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.06■■□□□ 1.6
TBC1D4O60343 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.06■■□□□ 1.6
TBC1D4O60343 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.06■■□□□ 1.6
TBC1D4O60343 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.06■■□□□ 1.6
TBC1D4O60343 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.06■■□□□ 1.6
TBC1D4O60343 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D4O60343 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.05■■□□□ 1.6
TBC1D4O60343 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D4O60343 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D4O60343 AC097639.1-201ENST00000565519 1891 ntBASIC25.05■■□□□ 1.6
TBC1D4O60343 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D4O60343 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D4O60343 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D4O60343 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TBC1D4O60343 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.04■■□□□ 1.6
TBC1D4O60343 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TBC1D4O60343 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.04■■□□□ 1.6
TBC1D4O60343 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.04■■□□□ 1.6
TBC1D4O60343 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.04■■□□□ 1.6
TBC1D4O60343 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TBC1D4O60343 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TBC1D4O60343 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.03■■□□□ 1.6
TBC1D4O60343 KRT16P3-201ENST00000439127 1283 ntBASIC25.03■■□□□ 1.6
TBC1D4O60343 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TBC1D4O60343 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TBC1D4O60343 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TBC1D4O60343 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.02■■□□□ 1.6
TBC1D4O60343 AF131216.4-201ENST00000638924 1588 ntBASIC25.02■■□□□ 1.6
TBC1D4O60343 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TBC1D4O60343 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
TBC1D4O60343 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
TBC1D4O60343 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.02■■□□□ 1.6
TBC1D4O60343 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TBC1D4O60343 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms