Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.73■□□□□ 0.27
PAX4O43316 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAX4O43316 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.72■□□□□ 0.27
PAX4O43316 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAX4O43316 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PAX4O43316 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAX4O43316 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.72■□□□□ 0.27
PAX4O43316 SPCS2P3-201ENST00000500401 656 ntBASIC16.72■□□□□ 0.27
PAX4O43316 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PAX4O43316 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.72■□□□□ 0.27
PAX4O43316 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAX4O43316 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.71■□□□□ 0.27
PAX4O43316 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.71■□□□□ 0.27
PAX4O43316 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAX4O43316 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAX4O43316 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAX4O43316 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAX4O43316 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PAX4O43316 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAX4O43316 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
PAX4O43316 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.71■□□□□ 0.27
PAX4O43316 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PAX4O43316 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.7■□□□□ 0.26
PAX4O43316 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAX4O43316 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PAX4O43316 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.7■□□□□ 0.26
PAX4O43316 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PAX4O43316 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAX4O43316 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PAX4O43316 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAX4O43316 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.7■□□□□ 0.26
PAX4O43316 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PAX4O43316 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX4O43316 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PAX4O43316 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX4O43316 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX4O43316 RPS2P7-201ENST00000447334 885 ntBASIC16.69■□□□□ 0.26
PAX4O43316 DUX4L18-201ENST00000553347 1267 ntBASIC16.69■□□□□ 0.26
PAX4O43316 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX4O43316 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX4O43316 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX4O43316 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX4O43316 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX4O43316 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX4O43316 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX4O43316 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PAX4O43316 AC139795.1-202ENST00000500444 432 ntBASIC16.68■□□□□ 0.26
PAX4O43316 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAX4O43316 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX4O43316 AC012354.3-201ENST00000623734 483 ntBASIC16.68■□□□□ 0.26
PAX4O43316 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX4O43316 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX4O43316 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.67■□□□□ 0.26
PAX4O43316 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.67■□□□□ 0.26
PAX4O43316 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.67■□□□□ 0.26
PAX4O43316 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.67■□□□□ 0.26
PAX4O43316 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PAX4O43316 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX4O43316 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.66■□□□□ 0.26
PAX4O43316 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PAX4O43316 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 ATP5G2P3-201ENST00000429083 425 ntBASIC16.66■□□□□ 0.26
PAX4O43316 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 BHLHE23-202ENST00000612929 1109 ntBASIC16.66■□□□□ 0.26
PAX4O43316 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PAX4O43316 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX4O43316 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.65■□□□□ 0.26
PAX4O43316 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.65■□□□□ 0.26
PAX4O43316 TSPY13P-201ENST00000338964 914 ntBASIC16.65■□□□□ 0.26
PAX4O43316 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 AC004987.1-201ENST00000428627 508 ntBASIC16.65■□□□□ 0.26
PAX4O43316 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
PAX4O43316 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.65■□□□□ 0.26
PAX4O43316 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX4O43316 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PAX4O43316 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAX4O43316 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PAX4O43316 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms