Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PER1O15534 MIR4508-201ENST00000584178 70 ntBASIC32.41■■■□□ 2.78
PER1O15534 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
PER1O15534 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PER1O15534 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PER1O15534 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PER1O15534 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PER1O15534 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
PER1O15534 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PER1O15534 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.39■■■□□ 2.78
PER1O15534 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
PER1O15534 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC32.39■■■□□ 2.78
PER1O15534 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PER1O15534 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.38■■■□□ 2.77
PER1O15534 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC32.38■■■□□ 2.77
PER1O15534 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PER1O15534 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
PER1O15534 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC32.38■■■□□ 2.77
PER1O15534 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PER1O15534 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PER1O15534 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PER1O15534 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.37■■■□□ 2.77
PER1O15534 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.37■■■□□ 2.77
PER1O15534 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PER1O15534 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PER1O15534 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
PER1O15534 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
PER1O15534 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.36■■■□□ 2.77
PER1O15534 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC32.36■■■□□ 2.77
PER1O15534 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PER1O15534 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PER1O15534 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PER1O15534 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
PER1O15534 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PER1O15534 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PER1O15534 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PER1O15534 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PER1O15534 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PER1O15534 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC32.34■■■□□ 2.77
PER1O15534 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC32.33■■■□□ 2.77
PER1O15534 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.33■■■□□ 2.77
PER1O15534 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PER1O15534 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.33■■■□□ 2.77
PER1O15534 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.33■■■□□ 2.77
PER1O15534 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.33■■■□□ 2.77
PER1O15534 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
PER1O15534 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
PER1O15534 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
PER1O15534 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
PER1O15534 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
PER1O15534 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC32.32■■■□□ 2.76
PER1O15534 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
PER1O15534 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PER1O15534 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PER1O15534 AL592295.1-201ENST00000400984 884 ntBASIC32.31■■■□□ 2.76
PER1O15534 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PER1O15534 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PER1O15534 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.31■■■□□ 2.76
PER1O15534 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PER1O15534 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PER1O15534 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
PER1O15534 RARRES2P1-201ENST00000474487 481 ntBASIC32.3■■■□□ 2.76
PER1O15534 AC022211.4-201ENST00000625094 2161 ntBASIC32.3■■■□□ 2.76
PER1O15534 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
PER1O15534 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PER1O15534 AC022616.5-201ENST00000518796 181 ntBASIC32.29■■■□□ 2.76
PER1O15534 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC32.29■■■□□ 2.76
PER1O15534 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
PER1O15534 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
PER1O15534 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.28■■■□□ 2.76
PER1O15534 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PER1O15534 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PER1O15534 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PER1O15534 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PER1O15534 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.27■■■□□ 2.76
PER1O15534 AC103724.3-201ENST00000564481 992 ntBASIC32.27■■■□□ 2.76
PER1O15534 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
PER1O15534 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PER1O15534 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PER1O15534 KRT8P33-201ENST00000508125 1423 ntBASIC32.26■■■□□ 2.76
PER1O15534 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PER1O15534 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.26■■■□□ 2.75
PER1O15534 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
PER1O15534 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.26■■■□□ 2.75
PER1O15534 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PER1O15534 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC32.26■■■□□ 2.75
PER1O15534 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PER1O15534 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
PER1O15534 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PER1O15534 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
PER1O15534 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PER1O15534 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.24■■■□□ 2.75
PER1O15534 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms