Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF223E7ERA6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF223E7ERA6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF223E7ERA6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF223E7ERA6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF223E7ERA6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF223E7ERA6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF223E7ERA6 AC079416.2-201ENST00000625035 1193 ntBASIC19.73■□□□□ 0.75
RNF223E7ERA6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF223E7ERA6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF223E7ERA6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF223E7ERA6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF223E7ERA6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF223E7ERA6 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF223E7ERA6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF223E7ERA6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF223E7ERA6 AL512631.2-201ENST00000604634 923 ntBASIC19.72■□□□□ 0.75
RNF223E7ERA6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF223E7ERA6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF223E7ERA6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF223E7ERA6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF223E7ERA6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RNF223E7ERA6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF223E7ERA6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RNF223E7ERA6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF223E7ERA6 AC133561.4-201ENST00000566112 224 ntBASIC19.71■□□□□ 0.75
RNF223E7ERA6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF223E7ERA6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF223E7ERA6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF223E7ERA6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF223E7ERA6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF223E7ERA6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF223E7ERA6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RNF223E7ERA6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.69■□□□□ 0.74
RNF223E7ERA6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF223E7ERA6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF223E7ERA6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF223E7ERA6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF223E7ERA6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF223E7ERA6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF223E7ERA6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF223E7ERA6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF223E7ERA6 PBX2P1-201ENST00000493219 1291 ntBASIC19.68■□□□□ 0.74
RNF223E7ERA6 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.68■□□□□ 0.74
RNF223E7ERA6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF223E7ERA6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF223E7ERA6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RNF223E7ERA6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF223E7ERA6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF223E7ERA6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF223E7ERA6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF223E7ERA6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF223E7ERA6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF223E7ERA6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF223E7ERA6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF223E7ERA6 AF131216.4-201ENST00000638924 1588 ntBASIC19.66■□□□□ 0.74
RNF223E7ERA6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF223E7ERA6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF223E7ERA6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF223E7ERA6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF223E7ERA6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF223E7ERA6 AC142381.2-201ENST00000566120 298 ntBASIC19.65■□□□□ 0.74
RNF223E7ERA6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.65■□□□□ 0.74
RNF223E7ERA6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF223E7ERA6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF223E7ERA6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF223E7ERA6 ZNRF2P3-201ENST00000424200 374 ntBASIC19.64■□□□□ 0.73
RNF223E7ERA6 AC106739.1-201ENST00000617035 715 ntBASIC19.64■□□□□ 0.73
RNF223E7ERA6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF223E7ERA6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF223E7ERA6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF223E7ERA6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF223E7ERA6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF223E7ERA6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF223E7ERA6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF223E7ERA6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF223E7ERA6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF223E7ERA6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF223E7ERA6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF223E7ERA6 AC092666.2-201ENST00000613287 246 ntBASIC19.62■□□□□ 0.73
RNF223E7ERA6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF223E7ERA6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF223E7ERA6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF223E7ERA6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF223E7ERA6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF223E7ERA6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms