Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
HFM1A2PYH4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC35.39■■■■□ 3.26
HFM1A2PYH4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC35.39■■■■□ 3.26
HFM1A2PYH4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
HFM1A2PYH4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
HFM1A2PYH4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC35.38■■■■□ 3.25
HFM1A2PYH4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
HFM1A2PYH4 THA1P-201ENST00000590384 1145 ntBASIC35.38■■■■□ 3.25
HFM1A2PYH4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC35.38■■■■□ 3.25
HFM1A2PYH4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC35.37■■■■□ 3.25
HFM1A2PYH4 MIR4281-201ENST00000580852 62 ntBASIC35.37■■■■□ 3.25
HFM1A2PYH4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC35.37■■■■□ 3.25
HFM1A2PYH4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC35.37■■■■□ 3.25
HFM1A2PYH4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
HFM1A2PYH4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
HFM1A2PYH4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC35.36■■■■□ 3.25
HFM1A2PYH4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC35.36■■■■□ 3.25
HFM1A2PYH4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
HFM1A2PYH4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC35.35■■■■□ 3.25
HFM1A2PYH4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
HFM1A2PYH4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
HFM1A2PYH4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
HFM1A2PYH4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC35.35■■■■□ 3.25
HFM1A2PYH4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HFM1A2PYH4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
HFM1A2PYH4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
HFM1A2PYH4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HFM1A2PYH4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC35.33■■■■□ 3.25
HFM1A2PYH4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
HFM1A2PYH4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC35.33■■■■□ 3.25
HFM1A2PYH4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC35.33■■■■□ 3.25
HFM1A2PYH4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC35.32■■■■□ 3.24
HFM1A2PYH4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
HFM1A2PYH4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
HFM1A2PYH4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
HFM1A2PYH4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
HFM1A2PYH4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
HFM1A2PYH4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC35.3■■■■□ 3.24
HFM1A2PYH4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
HFM1A2PYH4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
HFM1A2PYH4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
HFM1A2PYH4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC35.29■■■■□ 3.24
HFM1A2PYH4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
HFM1A2PYH4 OR2A1-AS1-204ENST00000470435 602 ntBASIC35.28■■■■□ 3.24
HFM1A2PYH4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
HFM1A2PYH4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC35.28■■■■□ 3.24
HFM1A2PYH4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
HFM1A2PYH4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC35.27■■■■□ 3.24
HFM1A2PYH4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC35.27■■■■□ 3.24
HFM1A2PYH4 Z92544.1-202ENST00000571933 1220 ntBASIC35.27■■■■□ 3.24
HFM1A2PYH4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
HFM1A2PYH4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC35.27■■■■□ 3.24
HFM1A2PYH4 GUSBP5-201ENST00000418136 578 ntBASIC35.26■■■■□ 3.24
HFM1A2PYH4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC35.26■■■■□ 3.24
HFM1A2PYH4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
HFM1A2PYH4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
HFM1A2PYH4 HES6-204ENST00000409182 863 ntTSL 2 BASIC35.24■■■■□ 3.23
HFM1A2PYH4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC35.24■■■■□ 3.23
HFM1A2PYH4 AC137630.3-201ENST00000607245 391 ntBASIC35.24■■■■□ 3.23
HFM1A2PYH4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC35.24■■■■□ 3.23
HFM1A2PYH4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
HFM1A2PYH4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
HFM1A2PYH4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC35.23■■■■□ 3.23
HFM1A2PYH4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
HFM1A2PYH4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC35.23■■■■□ 3.23
HFM1A2PYH4 GAK-223ENST00000628912 497 ntTSL 5 BASIC35.23■■■■□ 3.23
HFM1A2PYH4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC35.22■■■■□ 3.23
HFM1A2PYH4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
HFM1A2PYH4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC35.22■■■■□ 3.23
HFM1A2PYH4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC35.22■■■■□ 3.23
HFM1A2PYH4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC35.22■■■■□ 3.23
HFM1A2PYH4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
HFM1A2PYH4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.21■■■■□ 3.23
HFM1A2PYH4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
HFM1A2PYH4 SLC6A10P-202ENST00000431994 2058 ntBASIC35.2■■■■□ 3.23
HFM1A2PYH4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC35.2■■■■□ 3.23
HFM1A2PYH4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC35.2■■■■□ 3.23
HFM1A2PYH4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC35.2■■■■□ 3.23
HFM1A2PYH4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC35.2■■■■□ 3.23
HFM1A2PYH4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC35.2■■■■□ 3.23
HFM1A2PYH4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
HFM1A2PYH4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
HFM1A2PYH4 MIR6089-201ENST00000616698 64 ntBASIC35.19■■■■□ 3.22
HFM1A2PYH4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
HFM1A2PYH4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
HFM1A2PYH4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC35.17■■■■□ 3.22
HFM1A2PYH4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
HFM1A2PYH4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC35.17■■■■□ 3.22
HFM1A2PYH4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC35.17■■■■□ 3.22
HFM1A2PYH4 AC021242.3-201ENST00000607598 1377 ntBASIC35.17■■■■□ 3.22
HFM1A2PYH4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
HFM1A2PYH4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
HFM1A2PYH4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
HFM1A2PYH4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
HFM1A2PYH4 AC090877.2-201ENST00000558441 1738 ntBASIC35.16■■■■□ 3.22
HFM1A2PYH4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
HFM1A2PYH4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC35.16■■■■□ 3.22
HFM1A2PYH4 AF131216.4-201ENST00000638924 1588 ntBASIC35.16■■■■□ 3.22
HFM1A2PYH4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
HFM1A2PYH4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms