Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 ECEL1P2-201ENST00000461596 1295 ntBASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 RNF126P1-201ENST00000567452 1320 ntBASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 AC092296.2-201ENST00000589470 999 ntBASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 HSD17B1P1-201ENST00000590052 955 ntBASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.52■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 SMPD5-203ENST00000639008 1464 ntBASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 AL359504.2-201ENST00000605506 1601 ntBASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 AL157400.5-201ENST00000507624 621 ntBASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MIR3960-201ENST00000583311 91 ntBASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV8-3A0A0A6YYJ7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms