Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 TSPY13P-201ENST00000338964 914 ntBASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 AC004987.1-201ENST00000428627 508 ntBASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 ATP5G2P3-201ENST00000429083 425 ntBASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 DUSP8P4-201ENST00000399538 1761 ntBASIC16.87■□□□□ 0.29
TRAV26-1A0A087WT03 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 AL033527.3-201ENST00000566366 1196 ntBASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV26-1A0A087WT03 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 RNF165-205ENST00000588679 2904 ntBASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRAV26-1A0A087WT03 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV26-1A0A087WT03 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 KRT18P10-201ENST00000388836 1287 ntBASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 AC010501.1-201ENST00000606270 1962 ntBASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV26-1A0A087WT03 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 AL024507.2-201ENST00000606070 2574 ntBASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV26-1A0A087WT03 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 BHLHE23-202ENST00000612929 1109 ntBASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV26-1A0A087WT03 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 AC139795.1-202ENST00000500444 432 ntBASIC16.8■□□□□ 0.28
TRAV26-1A0A087WT03 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms