Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 AC023274.1-201ENST00000418278 595 ntBASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 AC091812.2-201ENST00000619081 385 ntBASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 AKAP8P1-201ENST00000434743 1349 ntBASIC19.25■□□□□ 0.67
CYP46A1Q9Y6A2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 AC073389.1-201ENST00000595595 795 ntBASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CYP46A1Q9Y6A2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 GPX1P2-201ENST00000429271 606 ntBASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 AL671277.1-201ENST00000429656 993 ntBASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 AP003680.1-201ENST00000598970 3660 ntBASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CYP46A1Q9Y6A2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms