Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGA11Q9Y5H2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AC093724.1-201ENST00000448659 1027 ntBASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AC016027.1-202ENST00000607927 1699 ntBASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 TSPY26P-202ENST00000565928 3884 ntBASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA11Q9Y5H2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 WASH6P-202ENST00000359512 1437 ntBASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 MIR648-201ENST00000385046 94 ntBASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 AC112191.1-201ENST00000523689 701 ntBASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA11Q9Y5H2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms