Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC016027.1-202ENST00000607927 1699 ntBASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDZRN3Q9UPQ7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 AL035456.1-201ENST00000456064 1369 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 ATP5G2P4-201ENST00000442175 420 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 TP53TG3HP-202ENST00000569755 579 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 AL138828.2-201ENST00000615812 383 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 SPDYE12P-201ENST00000618416 771 ntBASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDZRN3Q9UPQ7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 GGT4P-201ENST00000623672 1708 ntBASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 AC021097.1-201ENST00000607902 574 ntBASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.88■□□□□ 0.93
PDZRN3Q9UPQ7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 AL031731.1-201ENST00000642131 2094 ntBASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 AC098614.1-201ENST00000368528 745 ntBASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 ARSEP1-201ENST00000420443 635 ntBASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 AC009477.1-201ENST00000452936 217 ntBASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 AP3S2-216ENST00000617003 1561 ntBASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms