Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNRF3Q9ULT6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 AL133373.2-201ENST00000623187 2828 ntBASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 AL118558.3-201ENST00000607414 1079 ntBASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNRF3Q9ULT6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 AC009053.2-201ENST00000563701 2365 ntBASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 AC092506.1-202ENST00000401022 528 ntBASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 GNRHR2-203ENST00000581100 1187 ntBASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNRF3Q9ULT6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 C2orf27AP3-201ENST00000434123 579 ntBASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 FAM86HP-204ENST00000513466 959 ntBASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 AL354718.3-201ENST00000616414 581 ntBASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 CR382287.1-201ENST00000623954 586 ntBASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
ZNRF3Q9ULT6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZNRF3Q9ULT6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNRF3Q9ULT6 REXO1L8P-201ENST00000604378 1897 ntBASIC19.2■□□□□ 0.66
ZNRF3Q9ULT6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNRF3Q9ULT6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNRF3Q9ULT6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNRF3Q9ULT6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms