Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 HIST3H2BA-201ENST00000436555 524 ntBASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 GNAQP1-201ENST00000444815 1067 ntBASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 DOC2GP-202ENST00000514950 1163 ntBASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 AL358472.5-202ENST00000641448 1267 ntBASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 AL109936.8-201ENST00000641772 604 ntBASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND2AQ9ULE3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AC005034.1-201ENST00000426657 489 ntBASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 SPDYE18-201ENST00000510091 1050 ntBASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 API5-211ENST00000534695 560 ntTSL 5 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AC243562.2-201ENST00000561247 970 ntBASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AC004790.1-201ENST00000612686 536 ntBASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AC004461.2-201ENST00000629517 803 ntBASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DENND2AQ9ULE3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 SPDYE19P-201ENST00000338590 713 ntBASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 DFFBP1-201ENST00000433250 979 ntBASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 SRD5A3P1-201ENST00000603021 949 ntBASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 AL035252.4-201ENST00000624174 288 ntBASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DENND2AQ9ULE3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 AC063926.2-201ENST00000623766 1308 ntBASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DENND2AQ9ULE3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms