Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 PP12613-201ENST00000424958 2230 ntBASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 CNN2P8-201ENST00000421872 913 ntBASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
CXXC1Q9P0U4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 AC007969.1-201ENST00000433675 447 ntBASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 AC016629.1-201ENST00000596579 586 ntBASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CXXC1Q9P0U4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 FXNP2-201ENST00000411625 547 ntBASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 AL008638.5-201ENST00000623814 1298 ntBASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 AC015967.2-201ENST00000624092 234 ntBASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 AC006435.4-201ENST00000625037 234 ntBASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 AL356737.1-201ENST00000634391 234 ntBASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms